RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SVEP1Q4LDE5 3571 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 PRSS51A0A1B0GVH4 220 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 TNFSF11O14788 317 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 CASKO14936 926 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 EFNA2O43921 213 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 SS18L1O75177 396 aaPredicted RBP11.8□□□□□ -0.52
H3F3B-213ENST00000593254 NUDT14O95848 222 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 NID1P14543 1247 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 POU2F1P14859 743 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 UGT2B10P36537 528 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 RNF144AP50876 292 aaPredicted RBP11.8□□□□□ -0.52
H3F3B-213ENST00000593254 CLNS1AP54105 237 aaKnown RBP11.8□□□□□ -0.52
H3F3B-213ENST00000593254 WDR4P57081 412 aaKnown RBP11.8□□□□□ -0.52
H3F3B-213ENST00000593254 POU4F3Q15319 338 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 TOMM34Q15785 309 aaPredicted RBP11.8□□□□□ -0.52
H3F3B-213ENST00000593254 PDSS1Q5T2R2 415 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 ANXA8L1Q5VT79 327 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 HHATQ5VTY9 493 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 HBMQ6B0K9 141 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 PPP4R4Q6NUP7 873 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 LILRA2Q8N149 483 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF614Q8N883 585 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 OR4A15Q8NGL6 344 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 GPR119Q8TDV5 335 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 WFIKKN1Q96NZ8 548 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 GLRX2Q9NS18 164 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 KCNE5Q9UJ90 142 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 PCDHGB4Q9UN71 923 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
H3F3B-213ENST00000593254 GPC6Q9Y625 555 aaPredicted RBP11.8□□□□□ -0.52
H3F3B-213ENST00000593254 TMEM120BA0PK00 339 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 C16orf97H3BN30 126 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ETV2O00321 342 aaPredicted RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SDHDO14521 159 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SMAD7O15105 426 aaKnown RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SIAH2O43255 324 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF264O43296 627 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 EIF4E2O60573 245 aaKnown RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 FCMRO60667 390 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 STX11O75558 287 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SYNGR4O95473 234 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 NTN1O95631 604 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 PLGP00747 810 aaPredicted RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ALDOCP09972 364 aaKnown RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 PRKCAP17252 672 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SHC1P29353 583 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SFTPDP35247 375 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 KCNJ5P48544 419 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 CASP8Q14790 479 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF141Q15928 474 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 NDUFAF6Q330K2 333 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ARHGAP11BQ3KRB8 267 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SLC25A53Q5H9E4 307 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 SPANXN4Q5MJ08 99 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 PDZK1Q5T2W1 519 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 HEPHL1Q6MZM0 1159 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ANKRD42Q8N9B4 389 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 VPS37AQ8NEZ2 397 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 TOR1AIP2Q8NFQ8 470 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 FBXO27Q8NI29 283 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 OSTF1Q92882 214 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF524Q96C55 264 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 MRGPRX4Q96LA9 322 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 PAIP2Q9BPZ3 127 aaKnown RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 MED18Q9BUE0 208 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF350Q9GZX5 532 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 OR51I1Q9H343 314 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 KLHL28Q9NXS3 571 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 CLEC4AQ9UMR7 237 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 RAI1Q7Z5J4 1906 aaPredicted RBP11.79□□□□□ -0.52
H3F3B-213ENST00000593254 CADP27708 2225 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 ABCA1O95477 2261 aa11.79□□□□□ -0.52
H3F3B-213ENST00000593254 USF3Q68DE3 2245 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CENPVL1A0A0U1RR11 272 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 TRIM64A6NGJ6 449 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 SERINC4A6NH21 518 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 TRIM64BA6NI03 449 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 DEFB108AA8MXU0 73 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 E9PBE3 544 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 ZNF195O14628 629 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 KIAA0513O60268 411 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 DNAJA2O60884 412 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 SMPD2O60906 423 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 SNNO75324 88 aaPredicted RBP11.78□□□□□ -0.52
H3F3B-213ENST00000593254 UGT2B17O75795 530 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CPSF4O95639 269 aaKnown RBP11.78□□□□□ -0.52
H3F3B-213ENST00000593254 AGR2O95994 175 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 GUSBP08236 651 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 UBL4AP11441 157 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 UQCRC2P22695 453 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CRYGSP22914 178 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 SLC18A1P54219 525 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CTBP2P56545 445 aa11.78□□□□□ -0.52
H3F3B-213ENST00000593254 CARD18P57730 90 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms