RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ALS2CR12Q96Q35 445 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 LPAR4Q99677 370 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 MAP3K3Q99759 626 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM43Q9BTV4 400 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 TSGA10Q9BZW7 698 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SIRPDQ9H106 197 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 MTIF3Q9H2K0 278 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SNX25Q9H3E2 840 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SGK2Q9HBY8 427 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ZFP14Q9HCL3 533 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SPHK2Q9NRA0 654 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 NKIRAS1Q9NYS0 192 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 PDP1Q9P0J1 537 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SEC14L3Q9UDX4 400 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 PACSIN2Q9UNF0 486 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 CA5BQ9Y2D0 317 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 IFT52Q9Y366 437 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 PPIL1Q9Y3C6 166 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 CHD7Q9P2D1 2997 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 HELZ2Q9BYK8 2649 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RAD50Q92878 1312 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 LTBP2Q14767 1821 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ANKRD17O75179 2603 aaKnown RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 A0A087WUV0 522 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1B0GU03 582 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1W2PPV4 95 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ILVBLA1L0T0 632 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GOLGA8IPA6NC78 632 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 C15orf61A6NNL5 157 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 PDZK1P1A8MUH7 402 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 E9PMD0 336 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GOLGA6L19H0YKK7 550 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 H7C423 109 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ATP6AP2O75787 350 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF189O75820 626 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ZFAND5O76080 213 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 MT-ND1P03886 318 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 RETP07949 1114 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 TRIM49P0CI25 452 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 TRIM49CP0CI26 452 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 MAGEB1P43366 347 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 NSFP46459 744 aaKnown RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 SLC1A6P48664 564 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 RGS4P49798 205 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GDI2P50395 445 aaKnown RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 PPT1P50897 306 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GTF2A1P52655 376 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 CDH4P55283 916 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 PLOD1Q02809 727 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 CALCOCO2Q13137 446 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GPR176Q14439 515 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 OPCMLQ14982 345 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 CARTPTQ16568 116 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 HKDC1Q2TB90 917 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 HSDL1Q3SXM5 330 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 RABGAP1LQ5R372 815 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 PDZK1Q5T2W1 519 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 NKAIN2Q5VXU1 208 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 TTC23Q5W5X9 447 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 SLC25A25Q6KCM7 469 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 FAAP20Q6NZ36 180 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 SLC24A5Q71RS6 500 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ASPGQ86U10 573 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM126BQ8IUX1 230 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 MICU2Q8IYU8 434 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF781Q8N8C0 355 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 CEP112Q8N8E3 955 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ICA1LQ8NDH6 482 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 OR4K14Q8NGD5 310 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF596Q8TC21 504 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 C4orf36Q96KX1 117 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 KRT12Q99456 494 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 BBS2Q9BXC9 721 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 CUEDC2Q9H467 287 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 SMYD3Q9H7B4 428 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GEMIN7Q9H840 131 aaKnown RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 YAE1D1Q9NRH1 226 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 PNO1Q9NRX1 252 aaKnown RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 HACD3Q9P035 362 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 GCNT4Q9P109 453 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 RCOR3Q9P2K3 495 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 CFL2Q9Y281 166 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 PRSS21Q9Y6M0 314 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 EDC4Q6P2E9 1401 aaKnown RBP4.18□□□□□ -1.74
SMAD4-216ENST00000593223 SPEGQ15772 3267 aa4.18□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM120BA0PK00 339 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 GOLGA8MH3BSY2 632 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 NDUFAB1O14561 156 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 TRAPPC3O43617 180 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CYTH3O43739 400 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 RBBP9O75884 186 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 PDE5AO76074 875 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 MBP02144 154 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 VTNP04004 478 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ATP1B1P05026 303 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 GP1BBP13224 206 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 RPL35AP18077 110 aaKnown RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 LBPP18428 481 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 NT5EP21589 574 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms