RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 CRHP06850 196 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 IL11P20809 199 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 RPS4Y1P22090 263 aaKnown RBP13.05□□□□□ -0.32
DDX39A-217ENST00000592391 EIF1AXP47813 144 aaKnown RBP13.05□□□□□ -0.32
DDX39A-217ENST00000592391 DLX5P56178 289 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 DSTNP60981 165 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 EEF1A1P68104 462 aaKnown RBP13.05□□□□□ -0.32
DDX39A-217ENST00000592391 KCNJ10P78508 379 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 PON3Q15166 354 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 QPRTQ15274 297 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 MAPK11Q15759 364 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 PAGE3Q5JUK9 113 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 LRIF1Q5T3J3 769 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 EEF1A1P5Q5VTE0 462 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 HMGN2P46Q86SG4 172 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 ZNF295-AS1Q8N0V1 137 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 OR10D3Q8NH80 312 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 OR2V1Q8NHB1 315 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 FNDC9Q8TBE3 224 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 RNASE6Q93091 150 aaKnown RBP13.05□□□□□ -0.32
DDX39A-217ENST00000592391 ZNF524Q96C55 264 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 KLHL15Q96M94 604 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 THUMPD3Q9BV44 507 aaKnown RBP13.05□□□□□ -0.32
DDX39A-217ENST00000592391 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 RNF122Q9H9V4 155 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 JKAMPQ9P055 326 aa13.05□□□□□ -0.32
DDX39A-217ENST00000592391 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-217ENST00000592391 ITPR2Q14571 2701 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 A0A0J9YW62 118 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 A0A1W2PNV4 684 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 A0A1W2PP18 115 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 CLDN24A6NM45 220 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 EEF1E1-BLOC1S5C9J1V9 151 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TNFSF11O14788 317 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 EEF1E1O43324 174 aaKnown RBP13.04□□□□□ -0.32
DDX39A-217ENST00000592391 EFNA2O43921 213 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 BCAS1O75363 584 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TNFSF13O75888 250 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 OPN1LWP04000 364 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 BCHEP06276 602 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TFPTP0C1Z6 253 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX39A-217ENST00000592391 FCGR2AP12318 317 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 CD1EP15812 388 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 PGCP20142 388 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 UQCRC1P31930 480 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 CRISP3P54108 245 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 PLAURQ03405 335 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 FADDQ13158 208 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 GNA13Q14344 377 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 RGNQ15493 299 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 PDSS1Q5T2R2 415 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 METTL21CQ5VZV1 264 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 MSRB3Q8IXL7 192 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 CMIPQ8IY22 773 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 SLC38A5Q8WUX1 472 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TMEM234Q8WY98 164 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 C14orf79Q96F83 325 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TMEM120AQ9BXJ8 343 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 PIGMQ9H3S5 423 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 CCDC134Q9H6E4 229 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 SLC24A3Q9HC58 644 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 EXOSC3Q9NQT5 275 aaKnown RBP13.04□□□□□ -0.32
DDX39A-217ENST00000592391 FGFR1OP2Q9NVK5 253 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 SLC25A37Q9NYZ2 338 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 DSPPQ9NZW4 1301 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 CACNA1DQ01668 2161 aa13.04□□□□□ -0.32
DDX39A-217ENST00000592391 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
DDX39A-217ENST00000592391 TMEM247A6NEH6 219 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 GJE1A6NN92 205 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 CXCL13O43927 109 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
DDX39A-217ENST00000592391 VIMP08670 466 aaKnown RBP13.03□□□□□ -0.32
DDX39A-217ENST00000592391 BMP2P12643 396 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 PPIBP23284 216 aaKnown RBP13.03□□□□□ -0.32
DDX39A-217ENST00000592391 SHC1P29353 583 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 SSTR2P30874 369 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 SFTPDP35247 375 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 PEX19P40855 299 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 SESN3P58005 492 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 GUCY1A3Q02108 690 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 SELENBP1Q13228 472 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 HBMQ6B0K9 141 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 PEX5LQ8IYB4 626 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 WDR60Q8WVS4 1066 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 CNOT9Q92600 299 aaKnown RBP13.03□□□□□ -0.32
DDX39A-217ENST00000592391 TMEM19Q96HH6 336 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 ACER3Q9NUN7 267 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 DNAJB12Q9NXW2 375 aaKnown RBP13.03□□□□□ -0.32
DDX39A-217ENST00000592391 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 KCNN3Q9UGI6 736 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 PACSIN3Q9UKS6 424 aa13.03□□□□□ -0.32
DDX39A-217ENST00000592391 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
DDX39A-217ENST00000592391 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms