RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TRIM8Q9BZR9 551 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 RABEP2Q9H5N1 569 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM185BQ9H7F4 350 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 SLAMF8Q9P0V8 285 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 P2RX2Q9UBL9 471 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 TRIM33Q9UPN9 1127 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 SLC35A3Q9Y2D2 325 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF175Q9Y473 711 aa8.27□□□□□ -1.09
DNMT1-223ENST00000591239 GPC6Q9Y625 555 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-223ENST00000591239 MED12LQ86YW9 2145 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 HEATR5AQ86XA9 2040 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 A0A0J9YW62 118 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 A0A1W2PP18 115 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 AGAP5A6NIR3 686 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 CLDN24A6NM45 220 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 EEF1E1-BLOC1S5C9J1V9 151 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ETV2O00321 342 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 TNFSF11O14788 317 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ADAMDEC1O15204 470 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 EEF1E1O43324 174 aaKnown RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ATP8B1O43520 1251 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 EFNA2O43921 213 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 DNAJA2O60884 412 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 BCAS1O75363 584 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 NTN1O95631 604 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 VIMP08670 466 aaKnown RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 TROVE2P10155 538 aaKnown RBP eCLIP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 CD1EP15812 388 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 HOXB9P17482 250 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 PGCP20142 388 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 IL11P20809 199 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ELK4P28324 431 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 SFTPDP35247 375 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 PGM1P36871 562 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 EIF1AXP47813 144 aaKnown RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ASCL1P50553 236 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 DLX5P56178 289 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 DSTNP60981 165 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 KCNJ10P78508 379 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 GUCY1A3Q02108 690 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 PON3Q15166 354 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 QPRTQ15274 297 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 RGNQ15493 299 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 MAPK11Q15759 364 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 CTU2Q2VPK5 515 aaKnown RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 FBXL19-AS1Q494R0 122 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 SLC25A53Q5H9E4 307 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 PAGE3Q5JUK9 113 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 LRIF1Q5T3J3 769 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 METTL21CQ5VZV1 264 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 OR2A2Q6IF42 318 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ESPNLQ6ZVH7 1005 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 GDF7Q7Z4P5 450 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 FAM71CQ8NEG0 241 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 OR10D3Q8NH80 312 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 OR2V1Q8NHB1 315 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 FNDC9Q8TBE3 224 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 SLC38A5Q8WUX1 472 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 PMM1Q92871 262 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 LRRC46Q96FV0 321 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ADGRG7Q96K78 797 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 MRGPRX4Q96LA9 322 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 RAD21L1Q9H4I0 556 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF385DQ9H6B1 395 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 RNF122Q9H9V4 155 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 FGFR1OP2Q9NVK5 253 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 THUMPD1Q9NXG2 353 aaKnown RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 PAQR5Q9NXK6 330 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-223ENST00000591239 SLC25A37Q9NYZ2 338 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 CALML5Q9NZT1 146 aa8.26□□□□□ -1.09
DNMT1-223ENST00000591239 A0A1W2PNV4 684 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM247A6NEH6 219 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CXCL13O43927 109 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TNFSF13O75888 250 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 AQP8O94778 261 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 BCHEP06276 602 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CRHP06850 196 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TFPTP0C1Z6 253 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 NID1P14543 1247 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 IL7RP16871 459 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 RPS4Y1P22090 263 aaKnown RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 SHC1P29353 583 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 UQCRC1P31930 480 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CRISP3P54108 245 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CARD18P57730 90 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 SESN3P58005 492 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 EEF1A1P68104 462 aaKnown RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 PLAURQ03405 335 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 FADDQ13158 208 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 GNA13Q14344 377 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM176BQ3YBM2 270 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 PDSS1Q5T2R2 415 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 EEF1A1P5Q5VTE0 462 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 HBMQ6B0K9 141 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 PPP4R4Q6NUP7 873 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 MSRB3Q8IXL7 192 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CMIPQ8IY22 773 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms