RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 LRRC74AQ0VAA2 488 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF141Q15928 474 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 TNFAIP8L2Q6P589 184 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CBLN3Q6UW01 205 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 MEX3BQ6ZN04 569 aaKnown RBP10.09□□□□□ -0.79
SMAD4-211ENST00000590499 MSANTD1Q6ZTZ1 278 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 OLIG3Q7RTU3 272 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 GDF7Q7Z4P5 450 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 GGNQ86UU5 652 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 METTL25Q8N6Q8 603 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF527Q8NB42 609 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 B4GALNT2Q8NHY0 566 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 POC1BQ8TC44 478 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ZBTB8AQ96BR9 441 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF524Q96C55 264 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 SH3YL1Q96HL8 342 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ZFP3Q96NJ6 502 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 PANX1Q96RD7 426 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ZBTB18Q99592 522 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 TM9SF2Q99805 663 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 EBF4Q9BQW3 602 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 TCF7L2Q9NQB0 619 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 SLC6A13Q9NSD5 602 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 INTS9Q9NV88 658 aaKnown RBP10.09□□□□□ -0.79
SMAD4-211ENST00000590499 JKAMPQ9P055 326 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 VDAC3Q9Y277 283 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 DTNAQ9Y4J8 743 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 AP4B1Q9Y6B7 739 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
SMAD4-211ENST00000590499 ABCA4P78363 2273 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 AKAP6Q13023 2319 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 H3BML4 177 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 HMGN4O00479 90 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 DNAJA2O60884 412 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 UGT2B17O75795 530 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 TGM6O95932 706 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 TMIGD3P0DMS9 266 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-211ENST00000590499 BMP5P22003 454 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 CHI3L1P36222 383 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-211ENST00000590499 KHKP50053 298 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 ASCL1P50553 236 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 MVDP53602 400 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 SUMO3P55854 103 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-211ENST00000590499 FOXF2Q12947 444 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 CTU2Q2VPK5 515 aaKnown RBP10.08□□□□□ -0.8
SMAD4-211ENST00000590499 NDUFAF6Q330K2 333 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 PDZK1Q5T2W1 519 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 TYW3Q6IPR3 259 aaKnown RBP10.08□□□□□ -0.8
SMAD4-211ENST00000590499 FRRS1Q6ZNA5 592 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 RNF130Q86XS8 419 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 UBQLNLQ8IYU4 475 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 MIER2Q8N344 545 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 PHOSPHO1Q8TCT1 267 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 DYDC1Q8WWB3 177 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 OIT3Q8WWZ8 545 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 STON2Q8WXE9 905 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 RAB8BQ92930 207 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 ROPN1LQ96C74 230 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 C14orf79Q96F83 325 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 ADGRG7Q96K78 797 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 MAGEB18Q96M61 343 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 CCDC28BQ9BUN5 200 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 POLE3Q9NRF9 147 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 EXD2Q9NVH0 621 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 MKLN1Q9UL63 735 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 CARD8Q9Y2G2 431 aa10.08□□□□□ -0.8
SMAD4-211ENST00000590499 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 FAM234BA2RU67 622 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 SERINC4A6NH21 518 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 H3BNH8 94 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ETV2O00321 342 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 SYT5O00445 386 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 RFXANKO14593 260 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 POLR3GO15318 223 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 SEC14L5O43304 696 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 EIF4E2O60573 245 aaKnown RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 TNFSF13O75888 250 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 NTN1O95631 604 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 GSNP06396 782 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ZCCHC18P0CG32 403 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 HOXB9P17482 250 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 IL11P20809 199 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 OPRM1P35372 400 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 P2RX1P51575 399 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 ZNF41P51814 821 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 POLR2JP52435 117 aaKnown RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 AQP5P55064 265 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 EEFSECP57772 596 aaKnown RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 TXNL4AP83876 142 aaKnown RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 FOXF1Q12946 379 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 SKP2Q13309 424 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 GPR68Q15743 365 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 TOMM34Q15785 309 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-211ENST00000590499 MAPK14Q16539 360 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 TIGD2Q4W5G0 525 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 C16orf62Q7Z3J2 963 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 GRAMD2AQ8IUY3 354 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 FUNDC1Q8IVP5 155 aa10.07□□□□□ -0.8
SMAD4-211ENST00000590499 TRIML2Q8N7C3 387 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms