RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 COPZ1P61923 177 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 CHRNB3Q05901 458 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 CCNIQ14094 377 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 KPNB1Q14974 876 aaKnown RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 QPRTQ15274 297 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 TOMM34Q15785 309 aaPredicted RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 NPTX1Q15818 432 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 FAM98BQ52LJ0 330 aaKnown RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 RNFT1Q5M7Z0 435 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 DEF8Q6ZN54 512 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 FAM109AQ8N4B1 249 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 TAAR6Q96RI8 345 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 MCHR1Q99705 422 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF559Q9BR84 538 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 MAGIXQ9H6Y5 334 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 MED17Q9NVC6 651 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 QPCTLQ9NXS2 382 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 VDAC3Q9Y277 283 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 NINQ8N4C6 2090 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 PKD1L2Q7Z442 2459 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 TFECO14948 347 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-211ENST00000589753 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-211ENST00000589753 TPST2O60704 377 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 FMO6PO60774 539 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 CRYABP02511 175 aaKnown RBP13.78□□□□□ -0.2
ATG4D-211ENST00000589753 HPNP05981 417 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 HK1P19367 917 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 ALDH6A1Q02252 535 aaKnown RBP13.78□□□□□ -0.2
ATG4D-211ENST00000589753 PLPPR5Q32ZL2 321 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 COLEC12Q5KU26 742 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 WBP2NLQ6ICG8 309 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 ADGRG5Q8IZF4 528 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 CADM2Q8N3J6 435 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 CANT1Q8WVQ1 401 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 TMEM234Q8WY98 164 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 ST8SIA1Q92185 356 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 ZBTB8AQ96BR9 441 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 TRIM2Q9C040 744 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 OR2B2Q9GZK3 357 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 DENND2DQ9H6A0 471 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-211ENST00000589753 TMEM27Q9HBJ8 222 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 AURKCQ9UQB9 309 aa13.78□□□□□ -0.2
ATG4D-211ENST00000589753 MRPS18CQ9Y3D5 142 aaKnown RBP13.78□□□□□ -0.2
ATG4D-211ENST00000589753 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 hCG_2039718K7EN88 272 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ZIC3O60481 467 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 FABP3P05413 133 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 RAP2AP10114 183 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 GP1BBP13224 206 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 PRKCAP17252 672 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ITGA2P17301 1181 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 HOXB6P17509 224 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 TCEA1P23193 301 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 HTR2AP28223 471 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 SLC1A3P43003 542 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 SESN3P58005 492 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 VLDLRP98155 873 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 SLC10A1Q14973 349 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 OR1Q1Q15612 314 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 GLYR1Q49A26 553 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ENTPD8Q5MY95 495 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 PLEKHM3Q6ZWE6 761 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 LSMEM1Q8N8F7 131 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 LSM14AQ8ND56 463 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 FAM83FQ8NEG4 500 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 OR14L1PQ8NHC6 308 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 PHF10Q8WUB8 498 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF524Q96C55 264 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 C7orf34Q96L11 122 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 POLR2J2Q9GZM3 115 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 POLR2J3Q9H1A7 115 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ZDHHC11Q9H8X9 412 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 IL1RAPQ9NPH3 570 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 CTPS2Q9NRF8 586 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 RPS6KB2Q9UBS0 482 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 USP24Q9UPU5 2620 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 NTNG1Q9Y2I2 539 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 RPH3AQ9Y2J0 694 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 ENPP4Q9Y6X5 453 aa13.77□□□□□ -0.21
ATG4D-211ENST00000589753 DSPP15924 2871 aaKnown RBP13.77□□□□□ -0.21
ATG4D-211ENST00000589753 CPSF4LA6NMK7 179 aaKnown RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 ETV2O00321 342 aaPredicted RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 CELA3AP09093 270 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 MST1P26927 711 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 EIF1P41567 113 aaKnown RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 FOXF1Q12946 379 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 WIPI1Q5MNZ9 446 aaPredicted RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 RAET1LQ5VY80 246 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 TSEN54Q7Z6J9 526 aaKnown RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 YRDCQ86U90 279 aaKnown RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 CYP4Z1Q86W10 505 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 ZDHHC21Q8IVQ6 265 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 CISD2Q8N5K1 135 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms