RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PCDH17	O14917	1159 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	GADD45G	O95257	159 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	C1QB	P02746	253 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF883	P0CG24	379 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	FBL	P22087	321 aa	Known RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	RPS4Y1	P22090	263 aa	Known RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC9A3	P48764	834 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	GZMK	P49863	264 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	RAB25	P57735	213 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	RHAG	Q02094	409 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF155	Q12901	538 aa	Predicted RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF267	Q14586	743 aa	Predicted RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	DEF8	Q6ZN54	512 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	COX15	Q7KZN9	410 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	RDH10	Q8IZV5	341 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR8H2	Q8N162	312 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC38A9	Q8NBW4	561 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	TSLP	Q969D9	159 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	RNF31	Q96EP0	1072 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	PTCHD1	Q96NR3	888 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	FEV	Q99581	238 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	ARHGDIG	Q99819	225 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	RIBC2	Q9H4K1	309 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	MTHFD2L	Q9H903	347 aa	Predicted RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	NMNAT1	Q9HAN9	279 aa	Predicted RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	KCNE5	Q9UJ90	142 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	GPR55	Q9Y2T6	319 aa	Predicted RBP	14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	PCDHGA5	Q9Y5G8	931 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318		R4GN57	208 aa		14.24	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC35F4	A4IF30	521 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318		D6RAR5	112 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318		M0R082	166 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	AGRP	O00253	132 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	KIAA0513	O60268	411 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	PRKAR1B	P31321	381 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	GABRA3	P34903	492 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	DUSP3	P51452	185 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318		Q5BKY6	102 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	VWA2	Q5GFL6	755 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC5A8	Q8N695	610 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF615	Q8N8J6	731 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	COX18	Q8N8Q8	333 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ATG16L2	Q8NAA4	619 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	GALNT11	Q8NCW6	608 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR10G2	Q8NGC3	310 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR52P1P	Q8NH57	321 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	C9orf43	Q8TAL5	461 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	GPR151	Q8TDV0	419 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	PTPMT1	Q8WUK0	201 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	WDFY2	Q96P53	400 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	GFM1	Q96RP9	751 aa	Known RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	PELO	Q9BRX2	385 aa	Known RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	FUZ	Q9BT04	418 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	LIN7B	Q9HAP6	207 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	EIF3K	Q9UBQ5	218 aa	Known RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	SRPK3	Q9UPE1	567 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ERVK-19	Q9WJR5	959 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	SLC9A8	Q9Y2E8	581 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	TRBV4-1	A0A0J9YWV2	114 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318		A0A0X1KG70	313 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	LNP1	A1A4G5	178 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	KHNYN	O15037	678 aa	Known RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	TPST2	O60704	377 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	STX11	O75558	287 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	EPHA2	P29317	976 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	KRT20	P35900	424 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	RFX2	P48378	723 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	BIK	Q13323	160 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	MAPK14	Q16539	360 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ARHGAP40	Q5TG30	622 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF770	Q6IQ21	691 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	LYPD8	Q6UX82	237 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	NPSR1	Q6W5P4	371 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	KCTD20	Q7Z5Y7	419 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZAR1	Q86SH2	424 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	P3H2	Q8IVL5	708 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF619	Q8N2I2	560 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	OR9Q2	Q8NGE9	314 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF578	Q96N58	590 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	COPS4	Q9BT78	406 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	CNPPD1	Q9BV87	410 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	B3GNT4	Q9C0J1	378 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	RANGRF	Q9HD47	186 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	KRT84	Q9NSB2	600 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	IL20	Q9NYY1	176 aa		14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	ZNF443	Q9Y2A4	671 aa	Predicted RBP	14.23	□□□□□ -0.13
DDX39A-209	ENST00000589318	TCRBV16S1A1N1	A0A5B0	115 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	LINC00862	A6NCI5	91 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	LEUTX	A8MZ59	168 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	SEC14L5	O43304	696 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	BRINP1	O60477	761 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	PRAMEF2	O60811	474 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	AK1	P00568	194 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	IFNA16	P05015	189 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	ELAVL4	P26378	380 aa	Known RBP	14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	TGFBR1	P36897	503 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	PGD	P52209	483 aa		14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	POU6F2	P78424	691 aa	Predicted RBP	14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	PIN1	Q13526	163 aa	Predicted RBP	14.22	□□□□□ -0.13
DDX39A-209	ENST00000589318	GPR68	Q15743	365 aa		14.22	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms