RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 OLIG3Q7RTU3 272 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 GRINAQ7Z429 371 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 YRDCQ86U90 279 aaKnown RBP8.22□□□□□ -1.09
CIRBP-218ENST00000588344 RANBP3LQ86VV4 465 aaPredicted RBP8.22□□□□□ -1.09
CIRBP-218ENST00000588344 LSMEM1Q8N8F7 131 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 FIG4Q92562 907 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 CNOT9Q92600 299 aaKnown RBP8.22□□□□□ -1.09
CIRBP-218ENST00000588344 PROX1Q92786 737 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 SFXN2Q96NB2 322 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 TIMP4Q99727 224 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 POLR2J2Q9GZM3 115 aaKnown RBP8.22□□□□□ -1.09
CIRBP-218ENST00000588344 POLR2J3Q9H1A7 115 aaKnown RBP8.22□□□□□ -1.09
CIRBP-218ENST00000588344 RLIMQ9NVW2 624 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 ACAD8Q9UKU7 415 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 VDAC3Q9Y277 283 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 ZNF835Q9Y2P0 537 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 SPIN1Q9Y657 262 aaPredicted RBP8.22□□□□□ -1.09
CIRBP-218ENST00000588344 CHD6Q8TD26 2715 aa8.22□□□□□ -1.09
CIRBP-218ENST00000588344 SPTA1P02549 2419 aa8.21□□□□□ -1.09
CIRBP-218ENST00000588344 CENPVL1A0A0U1RR11 272 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 A0A1B0GUH1 482 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 OR2M5A3KFT3 312 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 CLDN24A6NM45 220 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SLC19A2O60779 497 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 WDR1O75083 606 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 DNAJC8O75937 253 aaPredicted RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 FESP07332 822 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 STSP08842 583 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 CELA3AP09093 270 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 ABOP16442 354 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 PRKCAP17252 672 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 HOXB6P17509 224 aaKnown RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 BMP7P18075 431 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 GGT1P19440 569 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 IFNA8P32881 189 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 RYKP34925 604 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 IDH2P48735 452 aaKnown RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SESN3P58005 492 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 NCALDP61601 193 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 RAC1P63000 192 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 DMTNQ08495 405 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 EPS8Q12929 822 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 DUSP7Q16829 419 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 GXYLT1Q4G148 440 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 CYBRD1Q53TN4 286 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 MTX3Q5HYI7 312 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 PDSS1Q5T2R2 415 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SWT1Q5T5J6 900 aaKnown RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 MTFR2Q6P444 385 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 ARSKQ6UWY0 536 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 RINLQ6ZS11 566 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 CHMP1BQ7LBR1 199 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 CLIP4Q8N3C7 705 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 MEIOBQ8N635 442 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SMYD1Q8NB12 490 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 FBXO27Q8NI29 283 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 FAM57AQ8TBR7 257 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 ZPLD1Q8TCW7 415 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SLC25A43Q8WUT9 341 aaPredicted RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 DNAJA4Q8WW22 397 aaPredicted RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 FAM162AQ96A26 154 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 ZNF559Q9BR84 538 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 THTPAQ9BU02 230 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 TRIM2Q9C040 744 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 TSPAN10Q9H1Z9 355 aaPredicted RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SLC6A15Q9H2J7 730 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 C12orf10Q9HB07 376 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 TMEM27Q9HBJ8 222 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SELENONQ9NZV5 590 aa8.21□□□□□ -1.1
CIRBP-218ENST00000588344 TESQ9UGI8 421 aaKnown RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 SAMD4AQ9UPU9 718 aaKnown RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 RPH3AQ9Y2J0 694 aaPredicted RBP8.21□□□□□ -1.1
CIRBP-218ENST00000588344 B4DXG7 233 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 NPIPA2E9PIF3 369 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 NPIPA3F8WFD2 350 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 AP3D1O14617 1153 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 OIP5O43482 229 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 GMFGO60234 142 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TPST1O60507 370 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 NTN1O95631 604 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 PNMTP11086 282 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TCN1P20061 433 aaPredicted RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 POU3F2P20265 443 aaPredicted RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 PSMA4P25789 261 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ACAA2P42765 397 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 POLR2HP52434 150 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 RGS8P57771 180 aaPredicted RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 B3GALT5-AS1P59052 145 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 RPS3AP61247 264 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 KCNC4Q03721 635 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 CRYZQ08257 329 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TRAP1Q12931 704 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 SELENBP1Q13228 472 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TRIM25Q14258 630 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 NRF1Q16656 503 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 NDUFAF6Q330K2 333 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 LRRC23Q53EV4 343 aaPredicted RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TMEM211Q6ICI0 200 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 C3orf33Q6P1S2 294 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms