RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF525Q8N782 197 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 ZFP28Q8NHY6 868 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 ACMSDQ8TDX5 336 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 REXO5Q96IC2 774 aaKnown RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 METTL2AQ96IZ6 378 aaKnown RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 USB1Q9BQ65 265 aaKnown RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 TSPYL1Q9H0U9 437 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 C12orf65Q9H3J6 166 aaKnown RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 PIGUQ9H490 435 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 ALG2Q9H553 416 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 TIGARQ9NQ88 270 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 DUSP22Q9NRW4 184 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 TMEM160Q9NX00 188 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 C1orf109Q9NX04 203 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 SH3BP4Q9P0V3 963 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 CDC42EP3Q9UKI2 254 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 GPC6Q9Y625 555 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-225ENST00000586385 ANK2Q01484 3957 aa10.48□□□□□ -0.73
BRCA1-225ENST00000586385 CENPVL1A0A0U1RR11 272 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 OR5H1A6NKK0 313 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 KIF2AO00139 706 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-225ENST00000586385 DNAJA2O60884 412 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 C8BP07358 591 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 GSTA1P08263 222 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 IGHV4-31P0DP07 118 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 UROSP10746 265 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 HPGDP15428 266 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 TTKP33981 857 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 SERPINB4P48594 390 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 SUMO3P55854 103 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-225ENST00000586385 DNAJB13P59910 316 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 CKAP4Q07065 602 aaKnown RBP10.47□□□□□ -0.73
BRCA1-225ENST00000586385 RASGEF1BQ0VAM2 473 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 CDC73Q6P1J9 531 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 MTERF4Q7Z6M4 381 aaKnown RBP10.47□□□□□ -0.73
BRCA1-225ENST00000586385 JADE3Q92613 823 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 MRGPRX4Q96LA9 322 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 STACQ99469 402 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 QRSL1Q9H0R6 528 aaKnown RBP10.47□□□□□ -0.73
BRCA1-225ENST00000586385 MANSC1Q9H8J5 431 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 ZCCHC3Q9NUD5 404 aaKnown RBP10.47□□□□□ -0.73
BRCA1-225ENST00000586385 GPATCH2Q9NW75 528 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 KLHL9Q9P2J3 617 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 KCNE5Q9UJ90 142 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 SLC25A15Q9Y619 301 aa10.47□□□□□ -0.73
BRCA1-225ENST00000586385 A0A1W2PR80 420 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 GJE1A6NN92 205 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 ZNF724A8MTY0 619 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 LSM1O15116 133 aaKnown RBP10.46□□□□□ -0.73
BRCA1-225ENST00000586385 RIPK2O43353 540 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 PLIN3O60664 434 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 LY6HO94772 140 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 HSPA4LO95757 839 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 NUDT14O95848 222 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 IGHV3-9P01782 118 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 FESP07332 822 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 MYL2P10916 166 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 LAMP1P11279 417 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 BCKDHAP12694 445 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-225ENST00000586385 GGT1P19440 569 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 CASP9P55211 416 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 SELENBP1Q13228 472 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 MLC1Q15049 377 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 QPRTQ15274 297 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 DCST2Q5T1A1 773 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 AGAP6Q5VW22 663 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 ABLIM2Q6H8Q1 611 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 OLIG3Q7RTU3 272 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 OR7A2PQ8NGA2 310 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 C10orf105Q8TEF2 133 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 DHRS9Q9BPW9 319 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 C19orf24Q9BVV8 132 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 TXLNGYQ9BZA5 131 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 CBLN4Q9NTU7 201 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 FAIMQ9NVQ4 179 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 GIMAP2Q9UG22 337 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 ATP6V1HQ9UI12 483 aa10.46□□□□□ -0.73
BRCA1-225ENST00000586385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.46□□□□□ -0.73
BRCA1-225ENST00000586385 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
BRCA1-225ENST00000586385 IGKV3D-15A0A087WSY6 115 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 SLC35F4A4IF30 521 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 ZNF716A6NP11 495 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 H3BQF6 201 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 H7C417 338 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 SLC28A1O00337 649 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 BCAS1O75363 584 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-225ENST00000586385 CRCPO75575 148 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 RAD51DO75771 328 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 LINC00032P0C843 101 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 IGFBP5P24593 272 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 CD40P25942 277 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 SLC7A1P30825 629 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 ZNF83P51522 516 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 ATP12AP54707 1039 aa10.45□□□□□ -0.74
BRCA1-225ENST00000586385 RPL38P63173 70 aaKnown RBP10.45□□□□□ -0.74
BRCA1-225ENST00000586385 ARL13AQ5H913 290 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms