RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 KRT73Q86Y46 540 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 TREML1Q86YW5 311 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 ANKFN1Q8N957 763 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 OR10Q1Q8NGQ4 319 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 GPR119Q8TDV5 335 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 ANKRD27Q96NW4 1050 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 TRIB1Q96RU8 372 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 CGREF1Q99674 301 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 SFXN3Q9BWM7 321 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 MYLK2Q9H1R3 596 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 SERINC1Q9NRX5 453 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 CLCF1Q9UBD9 225 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF232Q9UNY5 417 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 ICE1Q9Y2F5 2266 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 TENM4Q6N022 2769 aa12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 SPTAN1Q13813 2472 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-202ENST00000585540 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 CLCA1A8K7I4 914 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 C17orf51A8MQB3 221 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 PRSS44E7EML9 344 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 RCBTB2O95199 551 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 NTN1O95631 604 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 CLDN1O95832 211 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 PABPC4LP0CB38 370 aaKnown RBP12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ARAFP10398 606 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 PRKCAP17252 672 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 PSMA4P25789 261 aaKnown RBP12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 PCYT1AP49585 367 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 CYLC2Q14093 348 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 MMEL1Q495T6 779 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 RUNDC3AQ59EK9 446 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 CBLN3Q6UW01 205 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ARSKQ6UWY0 536 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 DLEU7Q6UYE1 221 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 C3P1Q6ZMU1 363 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF550Q7Z398 422 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 GRINAQ7Z429 371 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ARPINQ7Z6K5 226 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 POU5F2Q8N7G0 328 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 OR8J3Q8NGG0 315 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 OR52P1PQ8NH57 321 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 TMEM19Q96HH6 336 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 KLHL15Q96M94 604 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 RNF145Q96MT1 663 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 TREX2Q9BQ50 279 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 TUBA1CQ9BQE3 449 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 CPPED1Q9BRF8 314 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 IKZF5Q9H5V7 419 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 KCNJ16Q9NPI9 418 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 TIGARQ9NQ88 270 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ACER3Q9NUN7 267 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 GID8Q9NWU2 228 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 TNFRSF10DQ9UBN6 386 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 KCNE5Q9UJ90 142 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ANGPT4Q9Y264 503 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF337Q9Y3M9 751 aa12.46□□□□□ -0.41
PRKCSH-202ENST00000585540 FLNCQ14315 2725 aa12.46□□□□□ -0.42
PRKCSH-202ENST00000585540 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 LOC100653049A0A140TA62 436 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 ADAMDEC1O15204 470 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNHIT1O43257 154 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 KRT34O76011 436 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 FAM107AO95990 144 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 UBTFL6P0CB48 400 aaPredicted RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 SLC6A2P23975 617 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 CTSSP25774 331 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 HTR1EP28566 365 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 APOBEC1P41238 236 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 CLK1P49759 484 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 CCR4P51679 360 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 CDK6Q00534 326 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 FOXF1Q12946 379 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 QPRTQ15274 297 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 FBXL19-AS1Q494R0 122 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 INTS11Q5TA45 600 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 GTF2IRD2BQ6EKJ0 949 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 REEP3Q6NUK4 255 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 SERPINA11Q86U17 422 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 GTF2IRD2Q86UP8 949 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 C10orf111Q8N326 155 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 C11orf65Q8NCR3 313 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 HIPK4Q8NE63 616 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 RP9Q8TA86 221 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 ZNF607Q96SK3 696 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 TACO1Q9BSH4 297 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 PIGMQ9H3S5 423 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 GP6Q9HCN6 339 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 Q9UFV3 132 aa12.45□□□□□ -0.42
PRKCSH-202ENST00000585540 MCTS1Q9ULC4 181 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms