RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 KDF1Q8NAX2 398 aaPredicted RBP14.7□□□□□ -0.06
SS18-226ENST00000585241 OR2M3Q8NG83 312 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 GPR119Q8TDV5 335 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 SCMH1Q96GD3 660 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 SH3YL1Q96HL8 342 aaPredicted RBP14.7□□□□□ -0.06
SS18-226ENST00000585241 FNDC11Q9BVV2 318 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 SEMA6AQ9H2E6 1030 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 TMEM27Q9HBJ8 222 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 STOML1Q9UBI4 398 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 TESMINQ9Y4I5 508 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 PCDHGB7Q9Y5F8 929 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 PCDHGB6Q9Y5F9 930 aa14.7□□□□□ -0.06
SS18-226ENST00000585241 EML6Q6ZMW3 1958 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 A0A1B0GWA3 101 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 C2orf72A6NCS6 295 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 GNGT2O14610 69 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 NME2P1O60361 137 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 GADD45GO95257 159 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 FUT4P22083 530 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 NME2P22392 152 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 ELAVL4P26378 380 aaKnown RBP14.69□□□□□ -0.06
SS18-226ENST00000585241 MST1P26927 711 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 RYKP34925 604 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 TNFSF10P50591 281 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 CCR4P51679 360 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 ARG2P78540 354 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 OGFRL1Q5TC84 451 aaPredicted RBP14.69□□□□□ -0.06
SS18-226ENST00000585241 TIGD3Q6B0B8 471 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 WBP2NLQ6ICG8 309 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 SLC25A25Q6KCM7 469 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 SHQ1Q6PI26 577 aaKnown RBP14.69□□□□□ -0.06
SS18-226ENST00000585241 GDF7Q7Z4P5 450 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 PACS2Q86VP3 889 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 SVOPLQ8N434 492 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 OR5K1Q8NHB7 308 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 DNAJA4Q8WW22 397 aaPredicted RBP14.69□□□□□ -0.06
SS18-226ENST00000585241 C3orf49Q96BT1 292 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 ZNF524Q96C55 264 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 SLC41A3Q96GZ6 507 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 PSD2Q9BQI7 771 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 PRSS27Q9BQR3 290 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 GABARAPL1Q9H0R8 117 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 C12orf10Q9HB07 376 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 DEPPQ9NTK1 212 aa14.69□□□□□ -0.06
SS18-226ENST00000585241 KLF13Q9Y2Y9 288 aaPredicted RBP14.69□□□□□ -0.06
SS18-226ENST00000585241 SAMHD1Q9Y3Z3 626 aaKnown RBP14.69□□□□□ -0.06
SS18-226ENST00000585241 ZFHX4Q86UP3 3567 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 CACNA1GO43497 2377 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 A0A0G2JMM0 328 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 A0A1W2PPB8 328 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 A0A1W2PRS3 328 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ARRDC5A6NEK1 342 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 LRRC3CA6NJW4 275 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 KIR3DP1A8MWS1 328 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 TNFRSF11BO00300 401 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 CHP2O43745 196 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 F10P00742 488 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ITGB2P05107 769 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 SP1P08047 785 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 SLC1A3P43003 542 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 IDH2P48735 452 aaKnown RBP14.68□□□□□ -0.06
SS18-226ENST00000585241 IST1P53990 364 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 CDH12P55289 794 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 COPZ1P61923 177 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 FOXO1Q12778 655 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 TRAM2Q15035 370 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 TRIP10Q15642 601 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 INPP5JQ15735 1006 aaPredicted RBP14.68□□□□□ -0.06
SS18-226ENST00000585241 SNCBQ16143 134 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 TBR1Q16650 682 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 SLC25A53Q5H9E4 307 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ULK3Q6PHR2 472 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 LINC00114Q6XXX2 140 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 TMEM179BQ7Z7N9 219 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 NRG4Q8WWG1 115 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ST8SIA1Q92185 356 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 MPP4Q96JB8 637 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ZNF597Q96LX8 424 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 FAM173AQ9BQD7 235 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ZNF426Q9BUY5 554 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ADAM19Q9H013 955 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 DSN1Q9H410 356 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 CTPS2Q9NRF8 586 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 TAS2R10Q9NYW0 307 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 MED11Q9P086 117 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 RHCGQ9UBD6 479 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 OAZ3Q9UMX2 235 aa14.68□□□□□ -0.06
SS18-226ENST00000585241 ANKRD11Q6UB99 2663 aaPredicted RBP14.68□□□□□ -0.06
SS18-226ENST00000585241 PCNX3Q9H6A9 2034 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 TRBV4-1A0A0J9YWV2 114 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 CDC40O60508 579 aaKnown RBP eCLIP14.67□□□□□ -0.06
SS18-226ENST00000585241 NTN1O95631 604 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 CD46P15529 392 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 PEX2P28328 305 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 DNASE1L1P49184 302 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 SESN3P58005 492 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 QPRTQ15274 297 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 TOMM34Q15785 309 aaPredicted RBP14.67□□□□□ -0.06
SS18-226ENST00000585241 EXOC3L2Q2M3D2 409 aa14.67□□□□□ -0.06
SS18-226ENST00000585241 OR5M10Q6IEU7 315 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms