RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TWIST2Q8WVJ9 160 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 KISS1RQ969F8 398 aaPredicted RBP13.34□□□□□ -0.27
VAPA-209ENST00000585042 GTPBP3Q969Y2 492 aaKnown RBP13.34□□□□□ -0.27
VAPA-209ENST00000585042 CHMP6Q96FZ7 201 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 APOPT1Q96IL0 206 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 KLHDC3Q9BQ90 382 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 SRXN1Q9BYN0 137 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 C12orf65Q9H3J6 166 aaKnown RBP13.34□□□□□ -0.27
VAPA-209ENST00000585042 KLHL9Q9P2J3 617 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 CARD8Q9Y2G2 431 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 FIS1Q9Y3D6 152 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 DUXAA6NLW8 204 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 RGS16O15492 202 aaPredicted RBP13.33□□□□□ -0.28
VAPA-209ENST00000585042 DNAJA2O60884 412 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 CRLF1O75462 422 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 ADAP00813 363 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 THBS1P07996 1170 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 LAMP1P11279 417 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 PRKCAP17252 672 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 PRPS1L1P21108 318 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 SHC1P29353 583 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 SERPINB5P36952 375 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 TP53BP2Q13625 1128 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 TAB1Q15750 504 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 CLEC12BQ2HXU8 276 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 ZNF672Q499Z4 452 aaPredicted RBP13.33□□□□□ -0.28
VAPA-209ENST00000585042 ARL13AQ5H913 290 aaPredicted RBP13.33□□□□□ -0.28
VAPA-209ENST00000585042 HEPHL1Q6MZM0 1159 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 P2RY8Q86VZ1 359 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 OR7A2PQ8NGA2 310 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 OR5W2Q8NH69 310 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 RAB3IL1Q8TBN0 382 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 SMAP2Q8WU79 429 aaPredicted RBP13.33□□□□□ -0.28
VAPA-209ENST00000585042 MDFIQ99750 246 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 POTEKPQ9BYX7 375 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 NMUR2Q9GZQ4 415 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 GPATCH2Q9NW75 528 aa13.33□□□□□ -0.28
VAPA-209ENST00000585042 ZNF724A8MTY0 619 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 ZNF814B7Z6K7 855 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 PIP5K1BO14986 540 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 ZNF264O43296 627 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 AK1P00568 194 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 SLC7A1P30825 629 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 OR3A2P47893 321 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 C21orf58P58505 322 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 CBFBQ13951 182 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 ATP6AP1LQ52LC2 224 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 XKR7Q5GH72 579 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 C6orf136Q5SQH8 315 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 AP1ARQ63HQ0 302 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 BANPQ8N9N5 519 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 OIT3Q8WWZ8 545 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 OTUB1Q96FW1 271 aaPredicted RBP13.32□□□□□ -0.28
VAPA-209ENST00000585042 SDF2Q99470 211 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 BHLHE41Q9C0J9 482 aaPredicted RBP13.32□□□□□ -0.28
VAPA-209ENST00000585042 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 COQ10BQ9H8M1 238 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 PRR14LQ5THK1 2151 aa13.32□□□□□ -0.28
VAPA-209ENST00000585042 CYTIPO60759 359 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 PEX11AO75192 247 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 CHRNGP07510 517 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 GUSBP08236 651 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 SOD3P08294 240 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 EFNA1P20827 205 aaPredicted RBP13.31□□□□□ -0.28
VAPA-209ENST00000585042 FKBP2P26885 142 aaKnown RBP13.31□□□□□ -0.28
VAPA-209ENST00000585042 ALDH3A1P30838 453 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 TOMM34Q15785 309 aaPredicted RBP13.31□□□□□ -0.28
VAPA-209ENST00000585042 SPDYE7PQ495Y7 208 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.31□□□□□ -0.28
VAPA-209ENST00000585042 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
VAPA-209ENST00000585042 RIMKLAQ8IXN7 391 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 ST8SIA1Q92185 356 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 MUCL1Q96DR8 90 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 RADILQ96JH8 1075 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 REG4Q9BYZ8 158 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 TRIM2Q9C040 744 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 LAT2Q9GZY6 243 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 BARX1Q9HBU1 254 aaPredicted RBP13.31□□□□□ -0.28
VAPA-209ENST00000585042 SERINC1Q9NRX5 453 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 FAIMQ9NVQ4 179 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
VAPA-209ENST00000585042 GOLGA8QA0A0J9YX86 632 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 A0A1W2PP18 115 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 GOLGA8OA6NCC3 632 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 GOLGA8NF8WBI6 632 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 CLOCKO15516 846 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 OIP5O43482 229 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 TLX2O43763 284 aaPredicted RBP13.3□□□□□ -0.28
VAPA-209ENST00000585042 UBL4AP11441 157 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 ENPP1P22413 925 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 DMTNQ08495 405 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 MAD2L1Q13257 205 aaPredicted RBP13.3□□□□□ -0.28
VAPA-209ENST00000585042 VEZF1Q14119 521 aa13.3□□□□□ -0.28
VAPA-209ENST00000585042 PDK3Q15120 406 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms