RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	OR56A1	Q8NGH5	318 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR5D16	Q8NGK9	328 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	SMAP2	Q8WU79	429 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR5P2	Q8WZ92	322 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF524	Q96C55	264 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	TRMT61A	Q96FX7	289 aa	Known RBP	13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	PPP3R2	Q96LZ3	170 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR7D2	Q96RA2	312 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	HDHD5	Q9BXW7	423 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	POTEKP	Q9BYX7	375 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	HOXD1	Q9GZZ0	328 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	NGB	Q9NPG2	151 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	GPATCH2	Q9NW75	528 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	LIPT1	Q9Y234	373 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	HIVEP2	P31629	2446 aa		13.44	□□□□□ -0.26
SREBF1-222	ENST00000583732	TLN2	Q9Y4G6	2542 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	TLDC2	A0PJX2	215 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF814	B7Z6K7	855 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	NPHS1	O60500	1241 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	SOX30	O94993	753 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLU7	O95391	586 aa	Known RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	KRT16	P08779	473 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	DANCR	P0C864	163 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	EDNRA	P25101	427 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ADH6	P28332	368 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	IDUA	P35475	653 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ACVR1B	P36896	505 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ATP12A	P54707	1039 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	SUMO3	P55854	103 aa	Predicted RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	RPS26	P62854	115 aa	Known RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	QPRT	Q15274	297 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	UGT3A2	Q3SY77	523 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF672	Q499Z4	452 aa	Predicted RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	PDZK1	Q5T2W1	519 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	CXXC5	Q7LFL8	322 aa	Known RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	FNDC5	Q8NAU1	212 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	TOR1AIP2	Q8NFQ8	470 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR2W6P	Q8NHA6	318 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	HSD17B8	Q92506	261 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	APOPT1	Q96IL0	206 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	C3orf30	Q96M34	536 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR5B2	Q96R09	309 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF300	Q96RE9	604 aa	Predicted RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	PSD2	Q9BQI7	771 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	QRSL1	Q9H0R6	528 aa	Known RBP	13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	KLHL9	Q9P2J3	617 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLC17A7	Q9P2U7	560 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	DTNA	Q9Y4J8	743 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	ACTL7B	Q9Y614	415 aa		13.43	□□□□□ -0.26
SREBF1-222	ENST00000583732	JMJD1C	Q15652	2540 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	DPRX	A6NFQ7	191 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	OVOL3	O00110	214 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	ZNF264	O43296	627 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	NDUFS7	O75251	213 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	SPAG7	O75391	227 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	CRLF1	O75462	422 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	H6PD	O95479	791 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	UBL4A	P11441	157 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	PTN	P21246	168 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	RASGEF1B	Q0VAM2	473 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	ITGAD	Q13349	1161 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	CBFB	Q13951	182 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	GPR68	Q15743	365 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	ATP6AP1L	Q52LC2	224 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	XKR7	Q5GH72	579 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	IL23R	Q5VWK5	629 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	SEZ6L2	Q6UXD5	910 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	CLEC4F	Q8N1N0	589 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR5W2	Q8NH69	310 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	SFXN5	Q8TD22	340 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	DNAJA3	Q96EY1	480 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	MRGPRX4	Q96LA9	322 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	REPIN1	Q9BWE0	567 aa	Known RBP	13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	REG4	Q9BYZ8	158 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLCO5A1	Q9H2Y9	848 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	PPCS	Q9HAB8	311 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	EML4	Q9HC35	981 aa	Known RBP	13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	ATAD3A	Q9NVI7	634 aa		13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	GDF2	Q9UK05	429 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	ING1	Q9UK53	422 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-222	ENST00000583732	NUP214	P35658	2090 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	NPIPB9	F8W1W9	429 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	SMAD9	O15198	467 aa	Known RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	RAMP1	O60894	148 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	ADAM11	O75078	769 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	IGHV4-39	P01824	125 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	TP53	P04637	393 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	FGF4	P08620	206 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	OR3A2	P47893	321 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	CDH11	P55287	796 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	C21orf58	P58505	322 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	P2RY6	Q15077	328 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	PPA1	Q15181	289 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	PGGHG	Q32M88	737 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	LSM12	Q3MHD2	195 aa	Known RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	TIGD2	Q4W5G0	525 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	C6orf136	Q5SQH8	315 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	C3orf33	Q6P1S2	294 aa		13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	LSR	Q86X29	649 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF1-222	ENST00000583732	SLC43A2	Q8N370	569 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms