RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 NXF5Q9H1B4 397 aaKnown RBP10.96□□□□□ -0.65
GGA3-217ENST00000583667 UBQLN4Q9NRR5 601 aa10.96□□□□□ -0.65
GGA3-217ENST00000583667 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
GGA3-217ENST00000583667 NDRG4Q9ULP0 352 aaKnown RBP10.96□□□□□ -0.65
GGA3-217ENST00000583667 POFUT2Q9Y2G5 429 aa10.96□□□□□ -0.65
GGA3-217ENST00000583667 SEC16AO15027 2179 aa10.96□□□□□ -0.66
GGA3-217ENST00000583667 TRBV4-1A0A0J9YWV2 114 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 C9J4A7 227 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 PEX12O00623 359 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 KLF7O75840 302 aaPredicted RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 TNFAIP8O95379 198 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 DLGAP3O95886 979 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 CCNYL3P0C7X3 344 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 TBXA2RP21731 343 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 PNLIPRP2P54317 469 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 MRPL2Q5T653 305 aaKnown RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 ANKRD34AQ69YU3 496 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 C1orf94Q6P1W5 598 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 ZNF613Q6PF04 617 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 FAM198BQ6UWH4 519 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 DEF8Q6ZN54 512 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 LANCL3Q6ZV70 420 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 ZNF550Q7Z398 422 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 RANBP3LQ86VV4 465 aaPredicted RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 TSPYL5Q86VY4 417 aaPredicted RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 C9orf40Q8IXQ3 194 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 ZNF440Q8IYI8 595 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 RNF113BQ8IZP6 322 aaKnown RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 LSMEM1Q8N8F7 131 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 ZNF321PQ8N8H1 164 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 Q8NA96 180 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 APCDD1LQ8NCL9 501 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 FAM71CQ8NEG0 241 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 SLC38A4Q969I6 547 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 VMP1Q96GC9 406 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 HRASLS5Q96KN8 279 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 CNBD2Q96M20 576 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 LPAR4Q99677 370 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 MCHR1Q99705 422 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 ZNF559Q9BR84 538 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 CRB3Q9BUF7 120 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 MFRPQ9BY79 579 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 EXOSC3Q9NQT5 275 aaKnown RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 KRT84Q9NSB2 600 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 RLIMQ9NVW2 624 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 TESQ9UGI8 421 aaKnown RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 GPN3Q9UHW5 284 aaPredicted RBP10.95□□□□□ -0.66
GGA3-217ENST00000583667 POLHQ9Y253 713 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 SLC35A3Q9Y2D2 325 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 OR10H1Q9Y4A9 318 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 FER1L5A0AVI2 2057 aa10.95□□□□□ -0.66
GGA3-217ENST00000583667 SCN2AQ99250 2005 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 CENPVL1A0A0U1RR11 272 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 A0A1W2PQD3 144 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 SERINC4A6NH21 518 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 A8MUA0 341 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 H3BNH8 94 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 TSPAN2O60636 221 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 GASTP01350 101 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 GNAO1P09471 354 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 IFNGR2P38484 337 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ISL1P61371 349 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ESRRGP62508 458 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 RNF4P78317 190 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ALDH6A1Q02252 535 aaKnown RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 PLAURQ03405 335 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 NPRL3Q12980 569 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 GANABQ14697 944 aaKnown RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 NCF4Q15080 339 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 KCTD21Q4G0X4 260 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ENTPD8Q5MY95 495 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 FNDC7Q5VTL7 733 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ZNF691Q5VV52 312 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 HLA-DQA1Q5Y7H0 255 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 JMJD6Q6NYC1 403 aaPredicted RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 PODNL1Q6PEZ8 512 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 HSDL2Q6YN16 418 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 THAP5Q7Z6K1 395 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 APLFQ8IW19 511 aaPredicted RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 TAGAPQ8N103 731 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ZNF527Q8NB42 609 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 OR5L2Q8NGL0 311 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 OR4C3Q8NH37 302 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 OR52J3Q8NH60 311 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 CYGBQ8WWM9 190 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 MR1Q95460 341 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 MUS81Q96NY9 551 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 ULBP3Q9BZM4 244 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 TRIM2Q9C040 744 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 SOX17Q9H6I2 414 aaPredicted RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 AKIRIN1Q9H9L7 192 aaPredicted RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 PAPOLBQ9NRJ5 636 aaKnown RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 LUZP4Q9P127 313 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 PADI1Q9ULC6 663 aa10.94□□□□□ -0.66
GGA3-217ENST00000583667 TNRC6AQ8NDV7 1962 aaKnown RBP10.94□□□□□ -0.66
GGA3-217ENST00000583667 A0A087WUU8 490 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms