RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AGAP7PQ5VUJ5 663 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 XAF1Q6GPH4 301 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 NOTUMQ6P988 496 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 C16orf87Q6PH81 154 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TBPL2Q6SJ96 375 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 KDELC1Q6UW63 502 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM207Q6UWW9 146 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ISLR2Q6UXK2 745 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM26Q6ZUK4 368 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 EFL1Q7Z2Z2 1120 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 PLD3Q8IV08 490 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM86AQ8N2M4 240 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TEX26Q8N6G2 289 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 NPWQ8N729 165 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 SNX31Q8N9S9 440 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 PPTC7Q8NI37 304 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ANKRD49Q8WVL7 239 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 SMPDL3BQ92485 455 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 NDRG1Q92597 394 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 BIRC7Q96CA5 298 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 C19orf60Q96EN9 201 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 PPP1R36Q96LQ0 422 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 DACH2Q96NX9 599 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 MUS81Q96NY9 551 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 INTS14Q96SY0 518 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CGREF1Q99674 301 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 SPXQ9BT56 116 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TRIM62Q9BVG3 475 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CHID1Q9BWS9 393 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 OSBPL10Q9BXB5 764 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 NUSAP1Q9BXS6 441 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 RTN4RQ9BZR6 473 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC39A8Q9C0K1 460 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC25A51Q9H1U9 297 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ABCG8Q9H221 673 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CXCL16Q9H2A7 254 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 MMP27Q9H306 513 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 MFSD1Q9H3U5 465 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 ANKHQ9HCJ1 492 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 FBXO8Q9NRD0 319 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 GTSE1Q9NYZ3 720 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CRNNQ9UBG3 495 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 AP3M1Q9Y2T2 418 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TDRKHQ9Y2W6 561 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM32AQ9Y421 112 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT2A1Q9Y4X1 527 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM184BQ9Y519 407 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 DNAJC15Q9Y5T4 150 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 LIPGQ9Y5X9 500 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 CPQQ9Y646 472 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 LRRC37A2A6NM11 1700 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 RALGAPA2Q2PPJ7 1873 aa3.5□□□□□ -1.85
SMCHD1-208ENST00000583344 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 A0A087WW49 117 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 C1orf232A0A0U1RR37 186 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ISPDA4D126 451 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 MBLAC1A4D2B0 266 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 YJEFN3A6XGL0 299 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GOLGA8TH3BQL2 631 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 BOLA2-SMG1P6H3BVE0 249 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 K7EPI3 171 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC33A1O00400 549 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 EI24O14681 340 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 ANGPT2O15123 496 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC22A1O15245 554 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 AQP9O43315 295 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SPRY1O43609 319 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 HCRTO43612 131 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GPR137BO60478 399 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NOL3O60936 208 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 BCAS1O75363 584 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 RSL1D1O76021 490 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SNAP29O95721 258 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 OLFM2O95897 454 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 EPOP01588 193 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 VTNP04004 478 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 CCDC159P0C7I6 412 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 FRMD6-AS1P0C7T7 363 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 UROSP10746 265 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 DARSP14868 501 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NELFEP18615 380 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 PCMT1P22061 227 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 S100A1P23297 94 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC1A2P43004 574 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NKX2-1P43699 371 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GMPSP49915 693 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 SERPINH1P50454 418 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 HNRNPFP52597 415 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 PLA2G16P53816 162 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 YBEYP58557 167 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 LIPEQ05469 1076 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 MZT1Q08AG7 82 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 CDC20Q12834 499 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NPRL3Q12980 569 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NME3Q13232 169 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 RCAN2Q14206 197 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 GRB7Q14451 532 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 KRT33BQ14525 404 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 NR1D2Q14995 579 aa3.49□□□□□ -1.85
SMCHD1-208ENST00000583344 CYP51A1Q16850 503 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms