RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CHCHD2Q9Y6H1 151 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-220ENST00000581737 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
CSNK1D-220ENST00000581737 GXYLT2A0PJZ3 443 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 PRAMEF25A6NGN4 478 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 UGT2B11O75310 529 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 KCNK2O95069 426 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 SNX4O95219 450 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 LYNP07948 512 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 TFPTP0C1Z6 253 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 OR12D1P0DN82 309 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 CCL3P10147 92 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 CNR1P21554 472 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 RFX3P48380 749 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 CLK3P49761 638 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 GPAT3Q53EU6 434 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 DCST2Q5T1A1 773 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 C6orf52Q5T4I8 152 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 TMEM154Q6P9G4 183 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 FAM180AQ6UWF9 173 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 CHERPQ8IWX8 916 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 SETD9Q8NE22 299 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 OR4N2Q8NGD1 307 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 OR5D16Q8NGK9 328 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 HGDQ93099 445 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 TAMM41Q96BW9 452 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 EFHD2Q96C19 240 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 DTNBP1Q96EV8 351 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 OTUB1Q96FW1 271 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 TRNT1Q96Q11 434 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 SLC29A1Q99808 456 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 SERHL2Q9H4I8 314 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 ARMC7Q9H6L4 198 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 POLE3Q9NRF9 147 aa12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 BOKQ9UMX3 212 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-220ENST00000581737 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 hCG_2039718K7EN88 272 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 PDLIM1O00151 329 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 ALPLP05186 524 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 NGFRP08138 427 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 GUSBP08236 651 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 UBTFL6P0CB48 400 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 CYP4B1P13584 511 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 RHCEP18577 417 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 MYF6P23409 242 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 IGFBP5P24593 272 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 KCNJ10P78508 379 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 SPIBQ01892 262 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 EIPR1Q53HC9 387 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 SLC30A6Q6NXT4 461 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 FIGNL1Q6PIW4 674 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 VTCN1Q7Z7D3 282 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 LINC00471Q8N535 108 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 CHDHQ8NE62 594 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 OR2M7Q8NG81 312 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 FAM110BQ8TC76 370 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 TFAP2CQ92754 450 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 SNRNP40Q96DI7 357 aaKnown RBP12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 HES7Q9BYE0 225 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 YTHDF1Q9BYJ9 559 aaKnown RBP12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF556Q9HAH1 456 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 ASF1BQ9NVP2 202 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 BLOC1S6Q9UL45 172 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 TMCC3Q9ULS5 477 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 IFT52Q9Y366 437 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 GPC6Q9Y625 555 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 ENPP4Q9Y6X5 453 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 EML6Q6ZMW3 1958 aa12.32□□□□□ -0.44
CSNK1D-220ENST00000581737 ACOT7O00154 380 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 TNFRSF11BO00300 401 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 SYT5O00445 386 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 STX11O75558 287 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 UTS2O95399 124 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 OPN1SWP03999 348 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ANXA8P13928 327 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 HPGDP15428 266 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 RRM2P31350 389 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 EVI2BP34910 448 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 CASP3P42574 277 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 MASP1P48740 699 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 MEOX1P50221 254 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 CASP9P55211 416 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 VLDLRP98155 873 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ARHGAP11BQ3KRB8 267 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 SLC36A3Q495N2 470 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 NHSL2Q5HYW2 709 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 PRAMEF20Q5VT98 475 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 HEPHL1Q6MZM0 1159 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 CARM1Q86X55 608 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 SULF2Q8IWU5 870 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ATG16L2Q8NAA4 619 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF527Q8NB42 609 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ZFP62Q8NB50 900 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 OIT3Q8WWZ8 545 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 RAB8BQ92930 207 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF300Q96RE9 604 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms