RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	C16orf97	H3BN30	126 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	AQP8	O94778	261 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KRT75	O95678	551 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CSTA	P01040	98 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR12D1	P0DN82	309 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KIT	P10721	976 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PPP3CB	P16298	524 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	IL12A	P29459	219 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	DNAJA1	P31689	397 aa	Known RBP	11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SLC6A8	P48029	635 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	FOXF1	Q12946	379 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	NXN	Q6DKJ4	435 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	TYW3	Q6IPR3	259 aa	Known RBP	11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	VWA1	Q6PCB0	445 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	PLXDC2	Q6UX71	529 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	CDC20B	Q86Y33	519 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF619	Q8N2I2	560 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF614	Q8N883	585 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	FBXO27	Q8NI29	283 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	LINC01560	Q8TB33	94 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	OR10A4	Q9H209	315 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	RMND5A	Q9H871	391 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	VIPAS39	Q9H9C1	493 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	SERINC1	Q9NRX5	453 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	THUMPD1	Q9NXG2	353 aa	Known RBP	11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ZNF226	Q9NYT6	803 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	KCNE5	Q9UJ90	142 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	MKLN1	Q9UL63	735 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	TESMIN	Q9Y4I5	508 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	F8	P00451	2351 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	ITPR3	Q14573	2671 aa		11.28	□□□□□ -0.6
CDK5RAP3-222	ENST00000581708	NPIPA5	A0A0B4J1W7	369 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GOLGA8Q	A0A0J9YX86	632 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GOLGA8O	A6NCC3	632 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NPIPA7	E9PJI5	369 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GOLGA8N	F8WBI6	632 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HMGN4	O00479	90 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RFXANK	O14593	260 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TNFSF11	O14788	317 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	UBD	O15205	165 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	OIP5	O43482	229 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CXCL13	O43927	109 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NPIPA8	P0DM63	369 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NID1	P14543	1247 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	POU2F1	P14859	743 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	UGT2B10	P36537	528 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CPOX	P36551	454 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PGM1	P36871	562 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MAP2K6	P52564	334 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RAC3	P60763	192 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SIRPA	P78324	504 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SNTB1	Q13884	538 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GNA13	Q14344	377 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	QPRT	Q15274	297 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF239	Q16600	458 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZSWIM7	Q19AV6	140 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SLC9B1	Q4ZJI4	515 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	C3orf33	Q6P1S2	294 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	EPGN	Q6UW88	154 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FRRS1	Q6ZNA5	592 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	LRRC74B	Q6ZQY2	392 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF621	Q6ZSS3	439 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	BEND4	Q6ZU67	534 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HDX	Q7Z353	690 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	STK32C	Q86UX6	486 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CLEC4F	Q8N1N0	589 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TMCO5A	Q8N6Q1	288 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GOLGA6L1	Q8N7Z2	621 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	LRRC8C	Q8TDW0	803 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RNF128	Q8TEB7	428 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZFP90	Q8TF47	636 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	STON2	Q8WXE9	905 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MBD6	Q96DN6	1003 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NPAS1	Q99742	590 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FOXC2	Q99958	501 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	USB1	Q9BQ65	265 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ACER3	Q9NUN7	267 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ST6GALNAC2	Q9UJ37	374 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SPIN1	Q9Y657	262 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	USH1C	Q9Y6N9	552 aa		11.27	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	UQCRHL	A0A096LP55	91 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	AGAP5	A6NIR3	686 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	EFNA2	O43921	213 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SLC7A1	P30825	629 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	APOBEC1	P41238	236 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CLK1	P49759	484 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NME5	P56597	212 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KCNJ10	P78508	379 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FAM27E3	Q08E93	113 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FUT5	Q11128	374 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GPAT3	Q53EU6	434 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FBXW10	Q5XX13	1052 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MAVS	Q7Z434	540 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms