RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SAP130Q9H0E3 1048 aa17.49■□□□□ 0.39
SREBF1-220ENST00000581707 VIPAS39Q9H9C1 493 aa17.49■□□□□ 0.39
SREBF1-220ENST00000581707 AKAP6Q13023 2319 aa17.49■□□□□ 0.39
SREBF1-220ENST00000581707 PRAMEF27A3QJZ7 478 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 FAM221AA4D161 298 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 TGDSO95455 350 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 UBTFL6P0CB48 400 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 H2AFXP16104 143 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 CPOXP36551 454 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 POLR2JP52435 117 aaKnown RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 CARD18P57730 90 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 SKP2Q13309 424 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 QPRTQ15274 297 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 GUSBP1Q15486 140 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 SLC25A53Q5H9E4 307 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 FRRS1Q6ZNA5 592 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 FAM214BQ7L5A3 538 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 ZNF619Q8N2I2 560 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 MIER2Q8N344 545 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 ZNF524Q96C55 264 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 ZG16BQ96DA0 208 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 THUMPD3Q9BV44 507 aaKnown RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 POLDIP3Q9BY77 421 aaKnown RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 OPN3Q9H1Y3 402 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-220ENST00000581707 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 ITGB1BP2Q9UKP3 347 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 LIPT1Q9Y234 373 aa17.48■□□□□ 0.39
SREBF1-220ENST00000581707 ABCA4P78363 2273 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 HRNRQ86YZ3 2850 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 GJE1A6NN92 205 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 DNAJA2O60884 412 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 H6PDO95479 791 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 NTN1O95631 604 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 KRT75O95678 551 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 PLGP00747 810 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 CGAP01215 116 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 SHC1P29353 583 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 HPCAP84074 193 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 CHRNEQ04844 493 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 SYPL1Q16563 259 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 TMEM176BQ3YBM2 270 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 COX20Q5RI15 118 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 ZNF474Q6S9Z5 364 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 ANKFN1Q8N957 763 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 ATP6V1C2Q8NEY4 427 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 OR9I1Q8NGQ6 314 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 PNPT1Q8TCS8 783 aaKnown RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 GMPPAQ96IJ6 420 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 ITCHQ96J02 903 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 DACH2Q96NX9 599 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 TRNT1Q96Q11 434 aaKnown RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 CLEC4MQ9H2X3 399 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 RMND5AQ9H871 391 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 TIGARQ9NQ88 270 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 SLC6A13Q9NSD5 602 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 INTS9Q9NV88 658 aaKnown RBP17.47■□□□□ 0.39
SREBF1-220ENST00000581707 SLC35A3Q9Y2D2 325 aa17.47■□□□□ 0.39
SREBF1-220ENST00000581707 ETV2O00321 342 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-220ENST00000581707 POLR3GO15318 223 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-220ENST00000581707 ANP32DO95626 131 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 CD8BP10966 210 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 PGCP20142 388 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 PGM1P36871 562 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 PCYT1AP49585 367 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 IDH3AP50213 366 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 CTBP2P56545 445 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 PPP2R2AP63151 447 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 FAM27E3Q08E93 113 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 DNAJC14Q6Y2X3 702 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-220ENST00000581707 MSANTD1Q6ZTZ1 278 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 ZNF610Q8N9Z0 462 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 ZFP90Q8TF47 636 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 ST8SIA1Q92185 356 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 SLC39A3Q9BRY0 314 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 TCF7L2Q9NQB0 619 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 GLRX2Q9NS18 164 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-220ENST00000581707 NDRG3Q9UGV2 375 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 CLEC4AQ9UMR7 237 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 PROCRQ9UNN8 238 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 EMC9Q9Y3B6 208 aa17.46■□□□□ 0.39
SREBF1-220ENST00000581707 UQCRHLA0A096LP55 91 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 FAM234BA2RU67 622 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 SH3D21A4FU49 640 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 CHRM4P08173 479 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 ZCCHC18P0CG32 403 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 NR2F1P10589 423 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 CD79BP40259 229 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 MAGEA8P43361 318 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 SESN3P58005 492 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 STX1BP61266 288 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 KCNJ10P78508 379 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 SELENBP1Q13228 472 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 TIGD2Q4W5G0 525 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 GTF2IRD2BQ6EKJ0 949 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 LRRC74BQ6ZQY2 392 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 HMGN2P46Q86SG4 172 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 GTF2IRD2Q86UP8 949 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 FAM71CQ8NEG0 241 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms