RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 H2BFMP0C1H6 154 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 OR8U8P0C7N1 319 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 CYP2B6P20813 491 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 OTX2P32243 289 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 PPT1P50897 306 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 AP3M2P53677 418 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 DIO3P55073 304 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 ISXQ2M1V0 245 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 C10orf120Q5SQS8 335 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 C9orf129Q5T035 196 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 ATF7IP2Q5U623 682 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 METTL11BQ5VVY1 283 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 TTC23Q5W5X9 447 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 ATL3Q6DD88 541 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 FAM71F2Q6NXP2 309 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 ARL6IP6Q8N6S5 226 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 OR10H4Q8NGA5 316 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 OR10A7Q8NGE5 316 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 BADQ92934 168 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 SH3YL1Q96HL8 342 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 CNOT6LQ96LI5 555 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 POLR1EQ9GZS1 481 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 NANSQ9NR45 359 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 TMCC3Q9ULS5 477 aa3.39□□□□□ -1.87
SMCHD1-205ENST00000581383 IGHV2-70DA0A0C4DH43 119 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 A0A1W2PNV4 684 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 TUBAL3A6NHL2 446 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 E7ENQ6 273 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 NPIPA7E9PJI5 369 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 KIF2AO00139 706 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 SULT2B1O00204 365 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 BTN3A3O00478 584 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 HAT1O14929 419 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 MAGEB3O15480 346 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 TPST2O60704 377 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 HSPB1P04792 205 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 NPIPA8P0DM63 369 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 IGLL1P15814 213 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 PSMB1P20618 241 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 CD80P33681 288 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 PRPHP41219 470 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 OC90Q02509 493 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 SLC10A7Q0GE19 358 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 AANATQ16613 207 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 CFAP157Q5JU67 520 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 ATAD3BQ5T9A4 648 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 FHL5Q5TD97 284 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 LIPNQ5VXI9 398 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 TPRA1Q86W33 373 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 CEND1Q8N111 149 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 ANKFN1Q8N957 763 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 PELI1Q96FA3 418 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 C7orf34Q96L11 122 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 IL4I1Q96RQ9 567 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 MCHR1Q99705 422 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 TXN2Q99757 166 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 SPATA16Q9BXB7 569 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 TEX13BQ9BXU2 312 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 RAB18Q9NP72 206 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 SLC17A5Q9NRA2 495 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 B4GALT7Q9UBV7 327 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 NPIPA1Q9UND3 350 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 MRPS7Q9Y2R9 242 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 CHD4Q14839 1912 aa3.38□□□□□ -1.87
SMCHD1-205ENST00000581383 ADAMTS9Q9P2N4 1935 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 MBLAC1A4D2B0 266 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 METTL21EPA6NDL7 271 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 EPOPA6NHQ4 379 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 ZFP92A6NM28 416 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 PRRG1O14668 218 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 RS1O15537 224 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 TBL1XO60907 577 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 UGT2B17O75795 530 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 LY6G6DO95868 133 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 IGHV3-23P01764 117 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 HOXD10P28358 340 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 KIR2DS2P43631 304 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 SLC26A2P50443 739 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 NDPQ00604 133 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 LRRC36Q1X8D7 754 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 CCDC152Q4G0S7 254 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 TP53I3Q53FA7 332 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 DNM1P46Q6ZS02 220 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 MOB3BQ86TA1 216 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 ZNF683Q8IZ20 524 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 TMEM123Q8N131 208 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 SYT14Q8NB59 555 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 TRMT10AQ8TBZ6 339 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 PAQR8Q8TEZ7 354 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 RLN3Q8WXF3 142 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 NEIL2Q969S2 332 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 FGGYQ96C11 551 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 CNPY3Q9BT09 278 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 ZSCAN5AQ9BUG6 496 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 YTHDF1Q9BYJ9 559 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 NMUR2Q9GZQ4 415 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 NAT10Q9H0A0 1025 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 PTGES2Q9H7Z7 377 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 SIGLEC8Q9NYZ4 499 aa3.37□□□□□ -1.87
SMCHD1-205ENST00000581383 IL36GQ9NZH8 169 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms