RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ASPHD2Q6ICH7 369 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 ARCQ7LC44 396 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 DPY19L4Q7Z388 723 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 NRMQ8IXM6 262 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 MTURNQ8N3F0 131 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 C15orf54Q8N8G6 183 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 MYLPFQ96A32 169 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 ZDHHC11Q9H8X9 412 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 WDR76Q9H967 626 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 ANGPTL2Q9UKU9 493 aa2.99□□□□□ -1.93
SMCHD1-204ENST00000581226 THSD7BQ9C0I4 1608 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 A0A087WZY1 265 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 PPIAL4CA0A0B4J2A2 164 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 A0A1B0GWB2 263 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 CLDN5O00501 218 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 TRIM16O95361 564 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 PPIAL4GP0DN37 164 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 RNH1P13489 461 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 RAB40BQ12829 278 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 FAM199XQ6PEV8 388 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 GET4Q7L5D6 327 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 OR52I1Q8NGK6 324 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 OR1E3Q8WZA6 343 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 TMEM101Q96IK0 257 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 EBF4Q9BQW3 602 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 SH2D2AQ9NP31 389 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 B3GNT2Q9NY97 397 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 PLEKHG1Q9ULL1 1385 aa2.98□□□□□ -1.93
SMCHD1-204ENST00000581226 LRRK1Q38SD2 2015 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 RTL8CO15255 209 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 LALBAP00709 142 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 CALCBP10092 127 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 CCNE1P24864 410 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 APOC4P55056 127 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 CHRNB3Q05901 458 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 EIF4EBP2Q13542 120 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 CUL1Q13616 776 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 SLC5A12Q1EHB4 618 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 UNQ9370/PRO34162Q6UXP9 181 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 TIFABQ6ZNK6 161 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 C16orf62Q7Z3J2 963 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 ZNF740Q8NDX6 193 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 PNPT1Q8TCS8 783 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 ARHGDIGQ99819 225 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 SLC6A7Q99884 636 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 MAGT1Q9H0U3 335 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 APMAPQ9HDC9 416 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 U3KQV3 271 aa2.97□□□□□ -1.93
SMCHD1-204ENST00000581226 TTC21BQ7Z4L5 1316 aa2.96□□□□□ -1.93
SMCHD1-204ENST00000581226 KIF2AO00139 706 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CTAGE5O15320 804 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 HCN1O60741 890 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ECI2O75521 394 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 UGT2B17O75795 530 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 SLITRK3O94933 977 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 GNA14O95837 355 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ASNSP08243 561 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ZNF17P17021 662 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 HTR1EP28566 365 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CD80P33681 288 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 PLK1P53350 603 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 NUP107P57740 925 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 EWSR1Q01844 656 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 MECOMQ03112 1051 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CCDC173Q0VFZ6 552 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 DAZ2Q13117 558 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ARMCX2Q7L311 632 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 VRK2Q86Y07 508 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ENTHD1Q8IYW4 607 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CENPLQ8N0S6 344 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 OR51G2Q8NGK0 314 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 FBXO30Q8TB52 745 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CCDC110Q8TBZ0 833 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 PAQR8Q8TEZ7 354 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 DNAJA4Q8WW22 397 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 SLC35E1Q96K37 410 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ZNF385DQ9H6B1 395 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CALHM2Q9HA72 323 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 DAZ3Q9NR90 486 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 AIPL1Q9NZN9 384 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 WARS2Q9UGM6 360 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 BTNL2Q9UIR0 455 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 GSTK1Q9Y2Q3 226 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 MFHAS1Q9Y4C4 1052 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ALG6Q9Y672 507 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CDH10Q9Y6N8 788 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 CDC42BPBQ9Y5S2 1711 aa2.96□□□□□ -1.94
SMCHD1-204ENST00000581226 ATP8B3O60423 1300 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 A0A1B0GUA9 196 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 GSAPA4D1B5 854 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 CLDN3O15551 220 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 CA11O75493 328 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 SNAPINO95295 136 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 AK1P00568 194 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 TPSB2P20231 275 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 CYP2B6P20813 491 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 HTR2AP28223 471 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 CSNK1G2P78368 415 aa2.95□□□□□ -1.94
SMCHD1-204ENST00000581226 TPSAB1Q15661 275 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms