RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 LACC1Q8IV20 430 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 LSMEM1Q8N8F7 131 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 B4GALNT2Q8NHY0 566 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF563Q8TA94 476 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 C9orf43Q8TAL5 461 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 TMEM234Q8WY98 164 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 TM9SF4Q92544 642 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 MPP4Q96JB8 637 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 DHRS1Q96LJ7 313 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 HS6ST2Q96MM7 605 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 UTP23Q9BRU9 249 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 OSBPL11Q9BXB4 747 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ADNPQ9H2P0 1102 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 Q9H521 79 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 COQ10BQ9H8M1 238 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 NTN4Q9HB63 628 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 ACER3Q9NUN7 267 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 PDP1Q9P0J1 537 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 TUBD1Q9UJT1 453 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 A4GNTQ9UNA3 340 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 CHST2Q9Y4C5 530 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 PCDHGB7Q9Y5F8 929 aa12.73□□□□□ -0.37
CSNK1D-209ENST00000578904 MGAQ8IWI9 3026 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ANKRD33BA6NCL7 494 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 J3KTA2 159 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 FRS3O43559 492 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 OR6B1O95007 311 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 SNX4O95219 450 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 NUDT14O95848 222 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 WDPCPO95876 746 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 F10P00742 488 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 GKN3PP0CG01 181 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ALDH3A2P51648 485 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF136P52737 540 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 OC90Q02509 493 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 DAG1Q14118 895 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 SOWAHCQ53LP3 525 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ULK3Q6PHR2 472 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 MARCH3Q86UD3 253 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 RBM45Q8IUH3 476 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 CDK20Q8IZL9 346 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 CYP4Z2PQ8N1L4 340 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 CBR4Q8N4T8 237 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 GATSQ8NAP1 163 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 OR10G3Q8NGC4 313 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 OR4D11Q8NGI4 311 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 OR52J3Q8NH60 311 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 OR5W2Q8NH69 310 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 GRHL3Q8TE85 626 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 NRG4Q8WWG1 115 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 SLC41A3Q96GZ6 507 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 NODALQ96S42 347 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF184Q99676 751 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 TACO1Q9BSH4 297 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 GABARAPL1Q9H0R8 117 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 PTGES2Q9H7Z7 377 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 TIMMDC1Q9NPL8 285 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ANKRD10Q9NXR5 420 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 PLA2G3Q9NZ20 509 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 FLRT3Q9NZU0 649 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 CARD8Q9Y2G2 431 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 PCDHGB6Q9Y5F9 930 aa12.72□□□□□ -0.37
CSNK1D-209ENST00000578904 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 HTR3EA5X5Y0 456 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 OR5H15A6NDH6 313 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 CHP2O43745 196 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 PDGFAP04085 211 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 PNMTP11086 282 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 RYKP34925 604 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 CASP3P42574 277 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 ACAA2P42765 397 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 HTR3AP46098 478 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 SKP2Q13309 424 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 TUBA3CQ13748 450 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 CD226Q15762 336 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 NPTX1Q15818 432 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 EXOC3L2Q2M3D2 409 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 TUBA3EQ6PEY2 450 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 IZUMO2Q6UXV1 221 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 TSEN54Q7Z6J9 526 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 COMTD1Q86VU5 262 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 CADM2Q8N3J6 435 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 ZADH2Q8N4Q0 377 aa12.71□□□□□ -0.37
CSNK1D-209ENST00000578904 OR10G2Q8NGC3 310 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms