RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ZNF350Q9GZX5 532 aa14.41□□□□□ -0.1
VAPA-204ENST00000577901 PIGMQ9H3S5 423 aa14.41□□□□□ -0.1
VAPA-204ENST00000577901 NDRG3Q9UGV2 375 aa14.41□□□□□ -0.1
VAPA-204ENST00000577901 MKLN1Q9UL63 735 aa14.41□□□□□ -0.1
VAPA-204ENST00000577901 VDAC3Q9Y277 283 aa14.41□□□□□ -0.1
VAPA-204ENST00000577901 WDR45Q9Y484 360 aa14.41□□□□□ -0.1
VAPA-204ENST00000577901 OR2M5A3KFT3 312 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 HMGN4O00479 90 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 HEXAP06865 529 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 VIMP08670 466 aaKnown RBP14.4□□□□□ -0.1
VAPA-204ENST00000577901 TROVE2P10155 538 aaKnown RBP eCLIP14.4□□□□□ -0.1
VAPA-204ENST00000577901 ZNF708P17019 499 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 EEF1A1P68104 462 aaKnown RBP14.4□□□□□ -0.1
VAPA-204ENST00000577901 CD226Q15762 336 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 ZNF141Q15928 474 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 AGKQ53H12 422 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 EEF1A1P5Q5VTE0 462 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 METTL21CQ5VZV1 264 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 DNAJC14Q6Y2X3 702 aaPredicted RBP14.4□□□□□ -0.1
VAPA-204ENST00000577901 FUNDC1Q8IVP5 155 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 MEIOBQ8N635 442 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 OR5M1Q8NGP8 315 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 PNPT1Q8TCS8 783 aaKnown RBP14.4□□□□□ -0.1
VAPA-204ENST00000577901 GTF2H4Q92759 462 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 SPDL1Q96EA4 605 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 TRNT1Q96Q11 434 aaKnown RBP14.4□□□□□ -0.1
VAPA-204ENST00000577901 TPT1P8Q9HAU6 139 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 CLCF1Q9UBD9 225 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 PACSIN3Q9UKS6 424 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 ZNF337Q9Y3M9 751 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 AP4B1Q9Y6B7 739 aa14.4□□□□□ -0.1
VAPA-204ENST00000577901 SERINC4A6NH21 518 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 FAM171A2A8MVW0 826 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 A8MXE2 369 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 NR5A2O00482 541 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 ZNF264O43296 627 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 ARHGEF9O43307 516 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 EIF4E2O60573 245 aaKnown RBP14.39□□□□□ -0.11
VAPA-204ENST00000577901 UGT2B17O75795 530 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 NUDT14O95848 222 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 NR2F1P10589 423 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 ZNF17P17021 662 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 CPOXP36551 454 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 CRATP43155 626 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 P2RX1P51575 399 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 SUMO3P55854 103 aaPredicted RBP14.39□□□□□ -0.11
VAPA-204ENST00000577901 CLDN18P56856 261 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 GUCY1A3Q02108 690 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 ZNF117Q03924 483 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
VAPA-204ENST00000577901 PDZK1Q5T2W1 519 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 AP1ARQ63HQ0 302 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 TYW3Q6IPR3 259 aaKnown RBP14.39□□□□□ -0.11
VAPA-204ENST00000577901 SLC2A7Q6PXP3 512 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 ZNF619Q8N2I2 560 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 ARSGQ96EG1 525 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 SAP130Q9H0E3 1048 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 MED17Q9NVC6 651 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 THUMPD1Q9NXG2 353 aaKnown RBP14.39□□□□□ -0.11
VAPA-204ENST00000577901 CARD8Q9Y2G2 431 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 TESMINQ9Y4I5 508 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 DOCK7Q96N67 2140 aa14.39□□□□□ -0.11
VAPA-204ENST00000577901 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
VAPA-204ENST00000577901 MPDZO75970 2070 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 A0A096LPI6 279 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 C7orf72A4D263 438 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 H3BML4 177 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 KIAA0513O60268 411 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 TNFSF13O75888 250 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 H6PDO95479 791 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 C1QCP02747 245 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 UBL4AP11441 157 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 EIF1P41567 113 aaKnown RBP14.38□□□□□ -0.11
VAPA-204ENST00000577901 TMEM44Q2T9K0 475 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 PLPPR5Q32ZL2 321 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 Q5PR19 223 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 COX20Q5RI15 118 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 EIF3MQ7L2H7 374 aaKnown RBP14.38□□□□□ -0.11
VAPA-204ENST00000577901 GRAMD2AQ8IUY3 354 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 P3H2Q8IVL5 708 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 UBQLNLQ8IYU4 475 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 TOR1AIP2Q8NFQ8 470 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 PMM1Q92871 262 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 PAIP1Q9H074 479 aaKnown RBP14.38□□□□□ -0.11
VAPA-204ENST00000577901 RAD21L1Q9H4I0 556 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 CCDC134Q9H6E4 229 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 MTHFD2LQ9H903 347 aaPredicted RBP14.38□□□□□ -0.11
VAPA-204ENST00000577901 SLC6A13Q9NSD5 602 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 MRGBPQ9NV56 204 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 FGFR1OP2Q9NVK5 253 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 C6orf203Q9P0P8 240 aaPredicted RBP14.38□□□□□ -0.11
VAPA-204ENST00000577901 ICAM5Q9UMF0 924 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 PCDHB14Q9Y5E9 798 aa14.38□□□□□ -0.11
VAPA-204ENST00000577901 A0A1W2PNV4 684 aa14.37□□□□□ -0.11
VAPA-204ENST00000577901 A0A1W2PP18 115 aa14.37□□□□□ -0.11
VAPA-204ENST00000577901 TMEM247A6NEH6 219 aa14.37□□□□□ -0.11
VAPA-204ENST00000577901 CLIC1O00299 241 aa14.37□□□□□ -0.11
VAPA-204ENST00000577901 MSTNO14793 375 aa14.37□□□□□ -0.11
VAPA-204ENST00000577901 SMPD2O60906 423 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms