RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TRAF4Q9BUZ4 470 aaPredicted RBP12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 TRIM2Q9C040 744 aa12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 EML4Q9HC35 981 aaKnown RBP12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 CDC42EP3Q9UKI2 254 aa12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 EMCNQ9ULC0 261 aa12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 CARD8Q9Y2G2 431 aa12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 FIS1Q9Y3D6 152 aa12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 DTNAQ9Y4J8 743 aa12.61□□□□□ -0.39
SMARCD2-205ENST00000577686 TLN2Q9Y4G6 2542 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 ZNF724A8MTY0 619 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 SCAMP2O15127 329 aaKnown RBP12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 ZNF264O43296 627 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 LYPLA1O75608 230 aaPredicted RBP12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 AK1P00568 194 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 PRKCAP17252 672 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 CCT3P49368 545 aaKnown RBP12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 TSC22D1Q15714 1073 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 KLHL26Q53HC5 615 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 OR5W2Q8NH69 310 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 OR2W6PQ8NHA6 318 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 LILRB1Q8NHL6 650 aaPredicted RBP12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 SFXN5Q8TD22 340 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 SLC25A43Q8WUT9 341 aaPredicted RBP12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 ST8SIA1Q92185 356 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 C16orf58Q96GQ5 468 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 NPAS1Q99742 590 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 LPAR3Q9UBY5 353 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 ATP6V1HQ9UI12 483 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 ICAM5Q9UMF0 924 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 VPS13CQ709C8 3753 aa12.6□□□□□ -0.39
SMARCD2-205ENST00000577686 DUXAA6NLW8 204 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 LSM1O15116 133 aaKnown RBP12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 SSX4O60224 188 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 CYTIPO60759 359 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 ADAM11O75078 769 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 LYZL6O75951 148 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 CSF3P09919 207 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 LINC00032P0C843 101 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 DHRS4L1P0CG22 281 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 BCKDHAP12694 445 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 SLC25A16P16260 332 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 SHC1P29353 583 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 QPRTQ15274 297 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 PGGHGQ32M88 737 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 RFTN2Q52LD8 501 aaPredicted RBP12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 SLC25A53Q5H9E4 307 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 EXOSC6Q5RKV6 272 aaKnown RBP12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 FBXL14Q8N1E6 418 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 OTUB1Q96FW1 271 aaPredicted RBP12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 OR5B2Q96R09 309 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 PSD2Q9BQI7 771 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 COQ10BQ9H8M1 238 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 BAIAP2L1Q9UHR4 511 aa12.59□□□□□ -0.39
SMARCD2-205ENST00000577686 CIB4A0PJX0 185 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 DPRXA6NFQ7 191 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 OR5H1A6NKK0 313 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 GPR171O14626 319 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 ABCD4O14678 606 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 CFLARO15519 480 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 TRIM13O60858 407 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 FAM157CP0CG43 387 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 PGCP20142 388 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 PTAFRP25105 342 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 FKBP2P26885 142 aaKnown RBP12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 CHD3Q12873 2000 aaKnown RBP12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 RAB35Q15286 201 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 ATP6AP1LQ52LC2 224 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 KANK2Q63ZY3 851 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 CBLN3Q6UW01 205 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 Q6ZSR9 355 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 UBE2J2Q8N2K1 259 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 MZB1Q8WU39 189 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 TWIST2Q8WVJ9 160 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 OIT3Q8WWZ8 545 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 CBLN4Q9NTU7 201 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 PTGDR2Q9Y5Y4 395 aa12.58□□□□□ -0.4
SMARCD2-205ENST00000577686 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 A0A1W2PNR3 127 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 A0A1W2PPM1 405 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 CCT8L1PA6NM43 557 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 ZNF814B7Z6K7 855 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 ANKRD28O15084 1053 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 CYP7B1O75881 506 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 NTN1O95631 604 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 AGR2O95994 175 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 COX5AP20674 150 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 EFNA1P20827 205 aaPredicted RBP12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 PRPS1L1P21108 318 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 SOAT1P35610 550 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 C21orf58P58505 322 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 CHRNB3Q05901 458 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 PDK3Q15120 406 aa12.57□□□□□ -0.4
SMARCD2-205ENST00000577686 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms