RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 VRK2Q86Y07 508 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 CCDC36Q8IYA8 594 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 FAM58AQ8N1B3 248 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 LRRC75A-AS1Q8N1F1 130 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 FAM71CQ8NEG0 241 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 OR5T1Q8NG75 326 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 OR10Z1Q8NGY1 313 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 SLC25A36Q96CQ1 311 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 OPALINQ96PE5 141 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 ALKBH3Q96Q83 286 aaPredicted RBP4.89□□□□□ -1.63
NUP85-204ENST00000577208 VGLL1Q99990 258 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 ATG10Q9H0Y0 220 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 GANQ9H2C0 597 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 METTL8Q9H825 291 aaKnown RBP4.89□□□□□ -1.63
NUP85-204ENST00000577208 SP140LQ9H930 580 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 SLC25A19Q9HC21 320 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 NKIRAS1Q9NYS0 192 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 RBAKQ9NYW8 714 aaPredicted RBP4.89□□□□□ -1.63
NUP85-204ENST00000577208 ZNF346Q9UL40 294 aaKnown RBP4.89□□□□□ -1.63
NUP85-204ENST00000577208 RHBDD3Q9Y3P4 386 aa4.89□□□□□ -1.63
NUP85-204ENST00000577208 POLR3AO14802 1390 aaPredicted RBP4.89□□□□□ -1.63
NUP85-204ENST00000577208 A0A1B0GUH1 482 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 ARHGEF35A5YM69 484 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 TRPC5OSA6NMA1 111 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 A8MXK9 166 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 PDHXO00330 501 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 SOCS3O14543 225 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 COCHO43405 550 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 NDUFA2O43678 99 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 SNAP91O60641 907 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 HCN1O60741 890 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 SCN2BO60939 215 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 VPS26AO75436 327 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 RPP14O95059 124 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 UGT2B4P06133 528 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 KCNJ3P48549 501 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 NLRP11P59045 1033 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 RPS15P62841 145 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 GLO1Q04760 184 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 ZFP36L1Q07352 338 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 KRTAP1-1Q07627 177 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 NFATC2Q13469 925 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 RCAN2Q14206 197 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 UPP1Q16831 310 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 KLHL38Q2WGJ6 581 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 MS4A18Q3C1V0 323 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 ATF7IP2Q5U623 682 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 MCOLN2Q8IZK6 566 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 SELENOHQ8IZQ5 122 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 OR6F1Q8NGZ6 308 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 GPX8Q8TED1 209 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 SLCO4A1Q96BD0 722 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 MOCOSQ96EN8 888 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 PLEKHA8Q96JA3 519 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 TRIM51Q9BSJ1 452 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 CABLES2Q9BTV7 478 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 LRRC61Q9BV99 259 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 MRPL13Q9BYD1 178 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 TMEM185BQ9H7F4 350 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 NMUR1Q9HB89 426 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 CSNK1G1Q9HCP0 422 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 TREX1Q9NSU2 369 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 MRPL39Q9NYK5 338 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 CNOT2Q9NZN8 540 aaKnown RBP4.88□□□□□ -1.63
NUP85-204ENST00000577208 CLEC2DQ9UHP7 191 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 TBC1D24Q9ULP9 559 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 MGAT4BQ9UQ53 548 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 ELP1O95163 1332 aa4.88□□□□□ -1.63
NUP85-204ENST00000577208 IGHV4-30-2A0A087WSY4 118 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 WASH3PC4AMC7 463 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 FBP2O00757 339 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 KDELR3O43731 214 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 FCMRO60667 390 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 JAK2O60674 1132 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 GAS8-AS1O95177 125 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 NDUFB10O96000 172 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 PLEKP08567 350 aaPredicted RBP4.87□□□□□ -1.63
NUP85-204ENST00000577208 HSMCR30P0CW71 290 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 NQO2P16083 231 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ATP6V1C1P21283 382 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 YWHABP31946 246 aaKnown RBP4.87□□□□□ -1.63
NUP85-204ENST00000577208 GRIA1P42261 906 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 SERPINB9P50453 376 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 RAB9AP51151 201 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ACTBP60709 375 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ACTA2P62736 377 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ACTG1P63261 375 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ACTG2P63267 376 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ACTC1P68032 377 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 ACTA1P68133 377 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 MFGE8Q08431 387 aaPredicted RBP4.87□□□□□ -1.63
NUP85-204ENST00000577208 CD300CQ08708 224 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 MEF2DQ14814 521 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 SLC17A1Q14916 467 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 EXOSC7Q15024 291 aaKnown RBP4.87□□□□□ -1.63
NUP85-204ENST00000577208 ZNF146Q15072 292 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 PLCXD3Q63HM9 321 aa4.87□□□□□ -1.63
NUP85-204ENST00000577208 CDC42EP5Q6NZY7 148 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms