RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 EFNA2O43921 213 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 LMX1BO60663 402 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 CYTIPO60759 359 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 PGM3O95394 542 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 IGHV4-31P0DP07 118 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 ZNF16P17020 682 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 PRKCAP17252 672 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 DDX5P17844 614 aaKnown RBP10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 HNF1AP20823 631 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 USF1P22415 310 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 IGHV1-2P23083 117 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 FRKP42685 505 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 GZMKP49863 264 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 C3orf33Q6P1S2 294 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 CBLN3Q6UW01 205 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 GALNT5Q7Z7M9 940 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 OTUB1Q96FW1 271 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 C16orf58Q96GQ5 468 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 STACQ99469 402 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 CCT7Q99832 543 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 REEP4Q9H6H4 257 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 GRPEL1Q9HAV7 217 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 EMC3Q9P0I2 261 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 SH3BP4Q9P0V3 963 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 PYCARDQ9ULZ3 195 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 ICAM5Q9UMF0 924 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 CARD8Q9Y2G2 431 aa10.28□□□□□ -0.76
CTDNEP1-212ENST00000576613 A0A1W2PNR3 127 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 CIB4A0PJX0 185 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 SMAD9O15198 467 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 AKAP10O43572 662 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 TBX19O60806 448 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 UROSP10746 265 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 MYL2P10916 166 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 PRPH2P23942 346 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 FABP6P51161 128 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 CHRNB3Q05901 458 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 KIAA0040Q15053 153 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 KLHL26Q53HC5 615 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 CFAP157Q5JU67 520 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 FAM166AQ6J272 317 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF544Q6NX49 715 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 LRIG3Q6UXM1 1119 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 FRMD7Q6ZUT3 714 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 CNPY4Q8N129 248 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 UBE2J2Q8N2K1 259 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 TMCO5AQ8N6Q1 288 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 TOR1AIP2Q8NFQ8 470 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 ACMSDQ8TDX5 336 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 HTRA1Q92743 480 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 CDS1Q92903 461 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF300Q96RE9 604 aaPredicted RBP10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 PIGUQ9H490 435 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZCCHC3Q9NUD5 404 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 C1orf109Q9NX04 203 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 GIN1Q9NXP7 522 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 ING1Q9UK53 422 aaPredicted RBP10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 KCNS2Q9ULS6 477 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.775e-8■□□□□ 9.7
CTDNEP1-212ENST00000576613 PLCE1Q9P212 2302 aa10.27□□□□□ -0.77
CTDNEP1-212ENST00000576613 CCT8L1PA6NM43 557 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 C9JVG2 144 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 NPIPB8E9PQR5 432 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 SLC28A1O00337 649 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 RAD51DO75771 328 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 HMGN2P05204 90 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 KRT16P08779 473 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 SDC1P18827 310 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CD40P25942 277 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF83P51522 516 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CCR4P51679 360 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 EFNA4P52798 201 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ETF1P62495 437 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CHRNEQ04844 493 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 PDE7AQ13946 482 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CBFBQ13951 182 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 LASP1Q14847 261 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 TOMM34Q15785 309 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF385BQ569K4 471 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 SLC25A53Q5H9E4 307 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 EXOSC6Q5RKV6 272 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 FBXW9Q5XUX1 488 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CDC73Q6P1J9 531 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 SYT10Q6XYQ8 523 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 R3HCC1LQ7Z5L2 792 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF433Q8N7K0 673 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF614Q8N883 585 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR52N5Q8NH56 324 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR5W2Q8NH69 310 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 GPR119Q8TDV5 335 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 IFT81Q8WYA0 676 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 MTERF3Q96E29 417 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 FAM120BQ96EK7 910 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 TSSK3Q96PN8 268 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR5B2Q96R09 309 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 INPP5KQ9BT40 448 aa10.26□□□□□ -0.77
CTDNEP1-212ENST00000576613 CHODLQ9H9P2 273 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms