RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PCNX1Q96RV3 2341 aa11.55□□□□□ -0.56
TRAPPC1-206ENST00000573989 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CLEC18AA5D8T8 446 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CDHR4A6H8M9 788 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CFAP73A6NFT4 308 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 GJE1A6NN92 205 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 FXYD1O00168 92 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 GP1BBP13224 206 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF708P17019 499 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 PRKAR1BP31321 381 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 RYKP34925 604 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 PCGF2P35227 344 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 HTR3AP46098 478 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 LHX2P50458 406 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 B3GALT5-AS1P59052 145 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 COPZ1P61923 177 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 RAC1P63000 192 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 QPRTQ15274 297 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 ADRM1Q16186 407 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 NDUFAF6Q330K2 333 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 RABL3Q5HYI8 236 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 PDSS1Q5T2R2 415 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CLEC18BQ6UXF7 455 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 C3P1Q6ZMU1 363 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF836Q6ZNA1 936 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 PATL1Q86TB9 770 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 VRK2Q86Y07 508 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 GRAMD2AQ8IUY3 354 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 C10orf111Q8N326 155 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CLEC18CQ8NCF0 446 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 FBXO27Q8NI29 283 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZPLD1Q8TCW7 415 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 BCAS4Q8TDM0 211 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 SLC26A7Q8TE54 656 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 RASSF5Q8WWW0 418 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 RND1Q92730 232 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 SLC35B4Q969S0 331 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CCDC120Q96HB5 630 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 REXO5Q96IC2 774 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 RNF145Q96MT1 663 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 TRIM8Q9BZR9 551 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 EVA1AQ9H8M9 152 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 SERINC1Q9NRX5 453 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 PAQR5Q9NXK6 330 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 NDE1Q9NXR1 346 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 KLHL28Q9NXS3 571 aa11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 DNAJB12Q9NXW2 375 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 SPIN1Q9Y657 262 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC1-206ENST00000573989 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 FAAHO00519 579 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 OIP5O43482 229 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 DNAJA2O60884 412 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 EPPINO95925 133 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 LDLRP01130 860 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 PRKCAP17252 672 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 FKBP2P26885 142 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 APOBEC1P41238 236 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 STARP49675 285 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 CLDN18P56856 261 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 EEF1A1P68104 462 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 FOXF1Q12946 379 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 VEZF1Q14119 521 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 VMACQ2NL98 169 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 TMEM44Q2T9K0 475 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 SLC25A53Q5H9E4 307 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 DCST1Q5T197 706 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 FAM91A1Q658Y4 838 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 XKRXQ6PP77 449 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 PTOV1Q86YD1 416 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 ARMC8Q8IUR7 673 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 LACC1Q8IV20 430 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 UBQLNLQ8IYU4 475 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR5M1Q8NGP8 315 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR10Q1Q8NGQ4 319 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 SMPDL3BQ92485 455 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 DMRTA2Q96SC8 542 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 PIF1Q9H611 641 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 CALHM2Q9HA72 323 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 TAGLN3Q9UI15 199 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 FLNCQ14315 2725 aa11.53□□□□□ -0.56
TRAPPC1-206ENST00000573989 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 CD8B2A6NJW9 211 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 FAM220BPB1ANY3 271 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 SHISA8B8ZZ34 492 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ETV2O00321 342 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 SEC14L5O43304 696 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 IFNA14P01570 189 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 IL2RAP01589 272 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 AGAP20933 346 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 AQP1P29972 269 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 IDH2P48735 452 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 SESN3P58005 492 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 MXRA7P84157 204 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 PMPCAQ10713 525 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 MERTKQ12866 999 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 EPS8Q12929 822 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 SELENBP1Q13228 472 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 KRT72Q14CN4 511 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 TOMM34Q15785 309 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms