RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 DECR1Q16698 335 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 PLPPR5Q32ZL2 321 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 KRTAP21-3Q3LHN1 58 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 KANK2Q63ZY3 851 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 MFSD12Q6NUT3 480 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 CBLN3Q6UW01 205 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 PRIMA1Q86XR5 153 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 Q8N1Y9 231 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ZNF619Q8N2I2 560 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 KRTCAP2Q8N6L1 136 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 CCDC63Q8NA47 563 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 MAPK1IP1LQ8NDC0 245 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 MNS1Q8NEH6 495 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 OR7A2PQ8NGA2 310 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ACMSDQ8TDX5 336 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 UBLCP1Q8WVY7 318 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ROBO4Q8WZ75 1007 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 HOXB13Q92826 284 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 NEUROG1Q92886 237 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 DNAJA3Q96EY1 480 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 LRRC46Q96FV0 321 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 C18orf12Q96KH6 178 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ZFP3Q96NJ6 502 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 TBL1XR1Q9BZK7 514 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 PIGMQ9H3S5 423 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 SERHL2Q9H4I8 314 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ANKZF1Q9H8Y5 726 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 Q9N2J8 555 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 TAS2R7Q9NYW3 318 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ABCG2Q9UNQ0 655 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 MRPS18CQ9Y3D5 142 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 DNAJC15Q9Y5T4 150 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 ABCA1O95477 2261 aa8.24□□□□□ -1.09
NPLOC4-210ENST00000572824 IGLV3-32A0A0A0MS00 114 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 IGHV3-15A0A0B4J1V0 119 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 A0A1W2PRB8 838 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 AZIN1O14977 448 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 PIP5K1BO14986 540 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 BCAS1O75363 584 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 SPAG7O75391 227 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 SKAP2O75563 359 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 UROSP10746 265 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 LAMP1P11279 417 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 BCKDHAP12694 445 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CPA3P15088 417 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 JUNBP17275 347 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 KRT4P19013 534 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 PCSK6P29122 969 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 ALDH3A1P30838 453 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 SFTPDP35247 375 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 PEX19P40855 299 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 FRKP42685 505 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 KCNJ5P48544 419 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 DIO3P55073 304 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CASP9P55211 416 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 DNAJB13P59910 316 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 PRR5P85299 388 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 GANABQ14697 944 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 LASP1Q14847 261 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 SF3B4Q15427 424 aaKnown RBP eCLIP8.23□□□□□ -1.094e-10■■■■■ 58.7
NPLOC4-210ENST00000572824 KCNMB1Q16558 191 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 C21orf62-AS1Q17RA5 79 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 UGT3A2Q3SY77 523 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CFAP157Q5JU67 520 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CLEC9AQ6UXN8 241 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 STAC2Q6ZMT1 411 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 NUFIP2Q7Z417 695 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CAMKMTQ7Z624 323 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 HMGN2P46Q86SG4 172 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 IFT20Q8IY31 132 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 OR5AK3PQ8NH89 298 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 RAB3IL1Q8TBN0 382 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 ABHD3Q8WU67 409 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 IGFBPL1Q8WX77 278 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 JADE3Q92613 823 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CDS1Q92903 461 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 FAM120BQ96EK7 910 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CCL19Q99731 98 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 TSPYL1Q9H0U9 437 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 STMN4Q9H169 189 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 CXorf36Q9H7Y0 433 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 COQ10BQ9H8M1 238 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 MED17Q9NVC6 651 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 C1orf109Q9NX04 203 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 SH3BP4Q9P0V3 963 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 PROCRQ9UNN8 238 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 HIVEP2P31629 2446 aa8.23□□□□□ -1.09
NPLOC4-210ENST00000572824 ALG1L2C9J202 215 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 C22orf46C9J442 243 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 COPEO14579 308 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 EMC8O43402 210 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 LYPLA1O75608 230 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 PRPS2P11908 318 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 PRPH2P23942 346 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 FPR2P25090 351 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 ADSLP30566 484 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 CRHR1P34998 444 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms