RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SP5Q6BEB4 398 aaPredicted RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 NXNQ6DKJ4 435 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 TMEM211Q6ICI0 200 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 DLEU7Q6UYE1 221 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 MISPQ8IVT2 679 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 DMRTC2Q8IXT2 367 aaPredicted RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 EID3Q8N140 333 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 MIER2Q8N344 545 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 B4GALNT2Q8NHY0 566 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 ASB5Q8WWX0 329 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 ZBTB8AQ96BR9 441 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 THOC1Q96FV9 657 aaKnown RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 ZNF317Q96PQ6 595 aaPredicted RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 CPPED1Q9BRF8 314 aaPredicted RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 EXO5Q9H790 373 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 RNF122Q9H9V4 155 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 POLE3Q9NRF9 147 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 DNAJB12Q9NXW2 375 aaKnown RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 VAPAQ9P0L0 249 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 ING1Q9UK53 422 aaPredicted RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 FAF1Q9UNN5 650 aaPredicted RBP7.8□□□□□ -1.16
SMG6-210ENST00000572205 CARD8Q9Y2G2 431 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 AKAP6Q13023 2319 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 ABCA4P78363 2273 aa7.8□□□□□ -1.16
SMG6-210ENST00000572205 A0A087WZY1 265 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 A0A096LPI6 279 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 A0A0J9YW62 118 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 A0A1W2PNV4 684 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 AGAP5A6NIR3 686 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 H0Y3Z8 333 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 H3BML4 177 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 FBP2O00757 339 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SCDO00767 359 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 RFXANKO14593 260 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SMAD7O15105 426 aaKnown RBP7.79□□□□□ -1.16
SMG6-210ENST00000572205 STX11O75558 287 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 AQP8O94778 261 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 RCBTB2O95199 551 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 CGAP01215 116 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 UBL4AP11441 157 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 ELK4P28324 431 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 KIR2DL2P43627 348 aaPredicted RBP7.79□□□□□ -1.16
SMG6-210ENST00000572205 P2RX1P51575 399 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 CRYBA2P53672 197 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 GUCY1A3Q02108 690 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 LRRC74AQ0VAA2 488 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SELPLGQ14242 412 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SQLEQ14534 574 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 TOMM20Q15388 145 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 ADRM1Q16186 407 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SLC25A35Q3KQZ1 300 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
SMG6-210ENST00000572205 AAGABQ6PD74 315 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 BHLHB9Q6PI77 547 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 ZNF619Q8N2I2 560 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 CELF2-AS1Q8N7Q2 184 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 FAM169BQ8N8A8 192 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 TOR1AIP2Q8NFQ8 470 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 FNDC9Q8TBE3 224 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 CA5BP1Q8WTZ4 195 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SLC38A5Q8WUX1 472 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 TRNT1Q96Q11 434 aaKnown RBP7.79□□□□□ -1.16
SMG6-210ENST00000572205 TRIB1Q96RU8 372 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SRXN1Q9BYN0 137 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 TPT1P8Q9HAU6 139 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 SDHAF3Q9NRP4 125 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 FGFR1OP2Q9NVK5 253 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 TMEM45AQ9NWC5 275 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 WDR45Q9Y484 360 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 AP4B1Q9Y6B7 739 aa7.79□□□□□ -1.16
SMG6-210ENST00000572205 FAM221AA4D161 298 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 DUXAA6NLW8 204 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 HSPB2A8KAH6 182 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 NR5A2O00482 541 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 AP3D1O14617 1153 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 ZNF264O43296 627 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 SEC14L5O43304 696 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 HNRNPRO43390 633 aaKnown RBP7.78□□□□□ -1.16
SMG6-210ENST00000572205 EIF4E2O60573 245 aaKnown RBP7.78□□□□□ -1.16
SMG6-210ENST00000572205 FZD7O75084 574 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 GCM2O75603 506 aaPredicted RBP7.78□□□□□ -1.16
SMG6-210ENST00000572205 SOX30O94993 753 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 IL18BPO95998 194 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 PEPDP12955 493 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 POU3F2P20265 443 aaPredicted RBP7.78□□□□□ -1.16
SMG6-210ENST00000572205 BMP5P22003 454 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 MAGEA8P43361 318 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 GZMMP51124 257 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 EEF1A1P68104 462 aaKnown RBP7.78□□□□□ -1.16
SMG6-210ENST00000572205 TXNL4AP83876 142 aaKnown RBP7.78□□□□□ -1.16
SMG6-210ENST00000572205 SRYQ05066 204 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 QPRTQ15274 297 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 RGNQ15493 299 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 GPR68Q15743 365 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 HSPB2Q16082 182 aa7.78□□□□□ -1.16
SMG6-210ENST00000572205 VWA1Q6PCB0 445 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms