RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SFRP5Q5T4F7 317 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 DMKNQ6E0U4 476 aaPredicted RBP14.33□□□□□ -0.12
SMG6-207ENST00000570756 TMUB2Q71RG4 321 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 STPG2Q8N412 459 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 BRIX1Q8TDN6 353 aaKnown RBP14.33□□□□□ -0.12
SMG6-207ENST00000570756 MFRPQ9BY79 579 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 SLC35C2Q9NQQ7 365 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 HPF1Q9NWY4 346 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 MRPL15Q9P015 296 aaKnown RBP14.33□□□□□ -0.12
SMG6-207ENST00000570756 KLHL9Q9P2J3 617 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 FBXL2Q9UKC9 423 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 LRFN2Q9ULH4 789 aa14.33□□□□□ -0.12
SMG6-207ENST00000570756 GPR55Q9Y2T6 319 aaPredicted RBP14.33□□□□□ -0.12
SMG6-207ENST00000570756 KLF2Q9Y5W3 355 aaPredicted RBP14.33□□□□□ -0.12
SMG6-207ENST00000570756 A0A0B4J203 849 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 TCRBV16S1A1N1A0A5B0 115 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ZC3H12DA2A288 527 aaKnown RBP14.32□□□□□ -0.12
SMG6-207ENST00000570756 OR5F1O95221 314 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 APOC3P02656 99 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 HIST1H2ABP04908 130 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 HMGN2P05204 90 aaKnown RBP14.32□□□□□ -0.12
SMG6-207ENST00000570756 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
SMG6-207ENST00000570756 GABRA1P14867 456 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 RAD52P43351 418 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 TGM3Q08188 693 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ZNF626Q68DY1 528 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 OR5M10Q6IEU7 315 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 GSG1LQ6UXU4 331 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 HTR3DQ70Z44 454 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 HIST3H2AQ7L7L0 130 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 TRAPPC5Q8IUR0 188 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 OR56A1Q8NGH5 318 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 GHSRQ92847 366 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 HIST1H2ACQ93077 130 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 MOAP1Q96BY2 351 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 SLC41A3Q96GZ6 507 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 NPAS1Q99742 590 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 DPH7Q9BTV6 452 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 SLC6A17Q9H1V8 727 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 MED20Q9H944 212 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 PELI2Q9HAT8 420 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 FAM86C2PA6NEL3 165 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ANKRD61A6NGH8 418 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 WASH3PC4AMC7 463 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ARPC5O15511 151 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 NDUFS4O43181 175 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 PIP5K1CO60331 668 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 KHDRBS3O75525 346 aaKnown RBP14.32□□□□□ -0.12
SMG6-207ENST00000570756 ABLIM3O94929 683 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 IL5P05113 134 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 PRG2P13727 222 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 GJA1P17302 382 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 SLC16A1P53985 500 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ERVK-21P61565 698 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 KRT33BQ14525 404 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 GPR68Q15743 365 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 GDF7Q7Z4P5 450 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 VRK2Q86Y07 508 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 IZUMO1Q8IYV9 350 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 KCT2Q8NC54 265 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 OR1S1Q8NH92 325 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 FANK1Q8TC84 345 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 LGALS14Q8TCE9 139 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 TMEM255BQ8WV15 326 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 KISS1RQ969F8 398 aaPredicted RBP14.32□□□□□ -0.12
SMG6-207ENST00000570756 LMLNQ96KR4 655 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 DEFB118Q96PH6 123 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 MCHR1Q99705 422 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ARL6Q9H0F7 186 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 ZMIZ1Q9ULJ6 1067 aa14.32□□□□□ -0.12
SMG6-207ENST00000570756 KRT33AO76009 404 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 CKMP06732 381 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 ADRB1P08588 477 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 BMP7P18075 431 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 MAT2AP31153 395 aaKnown RBP14.31□□□□□ -0.12
SMG6-207ENST00000570756 PRKAR1BP31321 381 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 ARFIP1P53367 373 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 ERVFC1P60507 584 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 ACTC1P68032 377 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 ACTA1P68133 377 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 LHX8Q68G74 356 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 APOOLQ6UXV4 268 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 C17orf107Q6ZR85 190 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 OVCH1Q7RTY7 1134 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 CMTM8Q8IZV2 173 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 C7orf57Q8NEG2 295 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 OR2A12Q8NGT7 310 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 CXorf40AQ8TE69 158 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 FCAMRQ8WWV6 532 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 OR52D1Q9H346 318 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 LHX9Q9NQ69 397 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 WASH6PQ9NQA3 447 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 GMEB2Q9UKD1 530 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 PCDHGA9Q9Y5G4 932 aaKnown RBP14.31□□□□□ -0.12
SMG6-207ENST00000570756 LAMA3Q16787 3333 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 UNC119BA6NIH7 251 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 CDC42EP2O14613 210 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 PLATP00750 562 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 PYCR1P32322 319 aa14.31□□□□□ -0.12
SMG6-207ENST00000570756 DLX5P56178 289 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms