RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 KIAA0513O60268 411 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CBR3O75828 277 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CDK14O94921 469 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 SMC2O95347 1197 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CLDN9O95484 217 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CLPTM1O96005 669 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 ADORA3P0DMS8 318 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CCL2P13500 99 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CD1CP29017 333 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 EPHA2P29317 976 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 RRM2P31350 389 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 S100A5P33763 92 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 UGT1A5P35504 534 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CRYBB2P43320 205 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 NOVA1P51513 510 aaKnown RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 DNA2P51530 1060 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CDH11P55287 796 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 SKP1P63208 163 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 UBE2IP63279 158 aaKnown RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 ZP4Q12836 540 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 MRPL23Q16540 153 aaKnown RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 C3AR1Q16581 482 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 GLYR1Q49A26 553 aaPredicted RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 SLX4IPQ5VYV7 408 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 WSCD1Q658N2 575 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 SCYL2Q6P3W7 929 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 Q71RC1 249 aaPredicted RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 SCD5Q86SK9 330 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 MOB3BQ86TA1 216 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 RNF130Q86XS8 419 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 CACUL1Q86Y37 369 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 ST13P4Q8IZP2 240 aaPredicted RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 CCDC185Q8N715 623 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 PQLC3Q8N755 202 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 OR7G2Q8NG99 324 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 OR7A2PQ8NGA2 310 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 OR52N5Q8NH56 324 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 ACMSDQ8TDX5 336 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 MRPL24Q96A35 216 aaKnown RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 C18orf25Q96B23 403 aaPredicted RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 C4orf45Q96LM5 186 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 C12orf42Q96LP6 360 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 C10orf90Q96M02 699 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 ZNF578Q96N58 590 aaPredicted RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 FMO2Q99518 471 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 SLC29A1Q99808 456 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 TMEM246Q9BRR3 403 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 HINT2Q9BX68 163 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 TM6SF2Q9BZW4 377 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 ILKAPQ9H0C8 392 aaPredicted RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 FGF21Q9NSA1 209 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 KLRF1Q9NZS2 232 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 PILRBQ9UKJ0 227 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 SLC7A7Q9UM01 511 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 SLC22A14Q9Y267 594 aa4.03□□□□□ -1.76
CHD9-220ENST00000569794 EXOGQ9Y2C4 368 aaKnown RBP4.03□□□□□ -1.76
CHD9-220ENST00000569794 ARHGEF11O15085 1522 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 A0A0G2JNG1 304 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 A0A0J9YVX5 310 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 TRBV11-1A0A0K0K1C0 115 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 ZCWPW2A0A1B0GU75 182 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 SMCO2A6NFE2 343 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 FBLL1A6NHQ2 334 aaKnown RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 SHISA7A6NL88 538 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 A8MUA0 341 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 PDLIM1O00151 329 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 OR7A17O14581 309 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 CCSO14618 274 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 SCAMP2O15127 329 aaKnown RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 EPHB6O15197 1021 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 KDELR3O43731 214 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 CALUO43852 315 aaPredicted RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 HCN1O60741 890 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 DIRAS1O95057 198 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 GLAP06280 429 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 DPEP1P16444 411 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 TBXA2RP21731 343 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 GLRA1P23415 457 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 STOMP27105 288 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 RPL13AP40429 203 aaKnown RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 BRCC3P46736 316 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 RFX3P48380 749 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 ARRB1P49407 418 aaPredicted RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 SLC26A2P50443 739 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 ARHGDIAP52565 204 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 EFNB2P52799 333 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 PSMD4P55036 377 aaKnown RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 NTHL1P78549 312 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 LRRC63Q05C16 580 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 MFGE8Q08431 387 aaPredicted RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 GRB14Q14449 540 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 ITIH4Q14624 930 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 KIR2DS5Q14953 304 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 PLPP4Q5VZY2 271 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 OR52W1Q6IF63 320 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 PNCKQ6P2M8 343 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 RBMS3Q6XE24 437 aaKnown RBP4.02□□□□□ -1.77
CHD9-220ENST00000569794 GCNT7Q6ZNI0 430 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 LANCL3Q6ZV70 420 aa4.02□□□□□ -1.77
CHD9-220ENST00000569794 PIWIL4Q7Z3Z4 852 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms