RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ANKRD28O15084 1053 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 SMPD2O60906 423 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 SYNGR4O95473 234 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 PLGP00747 810 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 HPGDP15428 266 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ENPP1P22413 925 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ELK4P28324 431 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 RPL14P50914 215 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 P2RX1P51575 399 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ATP12AP54707 1039 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 CTBP2P56545 445 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 CLDN8P56748 225 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 CARD18P57730 90 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 FUT5Q11128 374 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 MAPK14Q16539 360 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 TMEM176BQ3YBM2 270 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 PDZK1Q5T2W1 519 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 AGBL2Q5U5Z8 902 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 OR4F3Q6IEY1 312 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 MTERF4Q7Z6M4 381 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 LRRC75A-AS1Q8N1F1 130 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ATP6V1C2Q8NEY4 427 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 LILRB1Q8NHL6 650 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 RAB3IL1Q8TBN0 382 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ADAMTS15Q8TE58 950 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 Q96MF0 132 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 CCL19Q99731 98 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 BHLHE41Q9C0J9 482 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ACTR6Q9GZN1 396 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 QRSL1Q9H0R6 528 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 ASIC5Q9NY37 505 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
GTF3C1-211ENST00000569653 PRAMEF27A3QJZ7 478 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF814B7Z6K7 855 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 H7C1Q1 480 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 DNAJA2O60884 412 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 LY6G6DO95868 133 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 PSMB1P20618 241 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 EIF1P41567 113 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 WDR4P57081 412 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 EMX2Q04743 252 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 BST1Q10588 318 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 SKP2Q13309 424 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 CAPRIN1Q14444 709 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 QPRTQ15274 297 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 SMU1Q2TAY7 513 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 SPDYE7PQ495Y7 208 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 SLC25A53Q5H9E4 307 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 YTHDF3Q7Z739 585 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 HMGN2P46Q86SG4 172 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 RFWD2Q8NHY2 731 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 S100PBPQ96BU1 408 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 PLPPR2Q96GM1 343 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 AKTIPQ9H8T0 292 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 ATAD3AQ9NVI7 634 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 PAQR5Q9NXK6 330 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 NOP53Q9NZM5 478 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 KLHL13Q9P2N7 655 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 FAF1Q9UNN5 650 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 DTNAQ9Y4J8 743 aa12.31□□□□□ -0.44
GTF3C1-211ENST00000569653 RNF103-CHMP3A0A140T963 221 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 SMAD9O15198 467 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 CFLARO15519 480 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ADAM11O75078 769 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 NUDT14O95848 222 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ATP6V1C1P21283 382 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ME2P23368 584 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 SOAT1P35610 550 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 PTH2RP49190 550 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 SUMO3P55854 103 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF141Q15928 474 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 PGS1Q32NB8 556 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 LSM12Q3MHD2 195 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 BEX5Q5H9J7 111 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ATG16L1Q676U5 607 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 CLEC9AQ6UXN8 241 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 C20orf204Q6ZNR8 217 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 C6orf120Q7Z4R8 191 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ANKRD46Q86W74 232 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 GOLGA6L1Q8N7Z2 621 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ZNF614Q8N883 585 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ZFP90Q8TF47 636 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 NEUROG1Q92886 237 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 PIGTQ969N2 578 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ZG16BQ96DA0 208 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ATP6V1G3Q96LB4 118 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 PRPF18Q99633 342 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 GLRX2Q9NS18 164 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 THAP1Q9NVV9 213 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 MKLN1Q9UL63 735 aa12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 GPC6Q9Y625 555 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-211ENST00000569653 ALPK2Q86TB3 2170 aa12.29□□□□□ -0.44
GTF3C1-211ENST00000569653 SERINC4A6NH21 518 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms