RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SAP18O00422 153 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 GPR137BO60478 399 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 SH3BGRLO75368 114 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 BCAS2O75934 225 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 TSPAN9O75954 239 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 FAM58BPP0C7Q3 252 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 CECR9P0C854 216 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 ELK4P28324 431 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 GP5P40197 560 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 GDF5P43026 501 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 KRTAP10-11P60412 298 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 IL2P60568 153 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 TGFBR3Q03167 851 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 PAX8Q06710 450 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 DHX34Q14147 1143 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 E2F2Q14209 437 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 TCEAL1Q15170 157 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 SLC18A3Q16572 532 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 HIST2H2ACQ16777 129 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 TRMT12Q53H54 448 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 PAGE2BQ5JRK9 111 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 HIST2H2AA3Q6FI13 130 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 KLHL24Q6TFL4 600 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 NPSR1Q6W5P4 371 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 ADAMTSL5Q6ZMM2 481 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 RNF144BQ7Z419 303 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 MARCH3Q86UD3 253 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 WFDC9Q8NEX5 89 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 OR4N2Q8NGD1 307 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 ACTRT2Q8TDY3 377 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 GATAD1Q8WUU5 269 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 DDB2Q92466 427 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 CFHR4Q92496 578 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 RAB8BQ92930 207 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 ITPKCQ96DU7 683 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 TRIM44Q96DX7 344 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 ARL5BQ96KC2 179 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 FAM71F1Q96KD3 344 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 VSTM2LQ96N03 204 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 SERPINB12Q96P63 405 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 HSD3B7Q9H2F3 369 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 OR51B5Q9H339 312 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 DDX31Q9H8H2 851 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 HHATLQ9HCP6 504 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 NPHS2Q9NP85 383 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 SLC7A10Q9NS82 523 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 MED17Q9NVC6 651 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 BFARQ9NZS9 450 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 GRID1Q9ULK0 1009 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 WIPI2Q9Y4P8 454 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 SORL1Q92673 2214 aa5.6□□□□□ -1.51
HERPUD1-217ENST00000569429 IGHV3OR16-10A0A075B7F0 116 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 C1orf226A1L170 272 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 TRAPPC2LH3BP13 241 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 AP3B1O00203 1094 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 CLGNO14967 610 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 EFNA2O43921 213 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 GMFGO60234 142 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 NCR1O76036 304 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 ZNF432O94892 652 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 HAUS5O94927 633 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 TTC4O95801 387 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 ANGPTL1O95841 491 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 IGLV1-44P01699 117 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 IGHMP01871 453 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 APRTP07741 180 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 MELTFP08582 738 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 IGLL1P15814 213 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 TCN1P20061 433 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 SERPINB1P30740 379 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 NTF4P34130 210 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 MSX2P35548 267 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 BSGP35613 385 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 EIF1P41567 113 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 SLC1A2P43004 574 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 RAD52P43351 418 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 PIK3CGP48736 1102 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 RAP1GDS1P52306 607 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 PRR5P85299 388 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 EGR3Q06889 387 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 PDK3Q15120 406 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 TRIP13Q15645 432 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 TBCCQ15814 346 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 TMEM176BQ3YBM2 270 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 NKAPLQ5M9Q1 402 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 OTUD3Q5T2D3 398 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 ARMC3Q5W041 872 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 FRG2Q64ET8 278 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 CYP20A1Q6UW02 462 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 LMNTD2Q8IXW0 634 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 LAS2Q8IYD9 372 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 FAM169BQ8N8A8 192 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 ZNF527Q8NB42 609 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 Q8NFD4 153 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 OR52E4Q8NGH9 312 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 ST7LQ8TDW4 575 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 ZFP90Q8TF47 636 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 SSMEM1Q8WWF3 244 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 UBE2E3Q969T4 207 aa5.59□□□□□ -1.51
HERPUD1-217ENST00000569429 UPRTQ96BW1 309 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms