RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 ZGRF1Q86YA3 2104 aa6.31□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SCN3AQ9NY46 2000 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 RP1L1Q8IWN7 2480 aaPredicted RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TTC36A6NLP5 189 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ENO4A6NNW6 628 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PGRMC1O00264 195 aaKnown RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CCL21O00585 134 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 DVL1O14640 695 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OR1F1O43749 312 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 WDR1O75083 606 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 GUCA1CO95843 209 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 C8GP07360 202 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 HIST1H2AGP0C0S8 130 aaPredicted RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PGAM1P18669 254 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 HIST1H2ADP20671 130 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CCT5P48643 541 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 DVL1P1P54792 670 aaPredicted RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ISL1P61371 349 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OLR1P78380 273 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ACTN3Q08043 901 aaPredicted RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 GTF2H2Q13888 395 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ABRAXAS2Q15018 415 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 NSDHLQ15738 373 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 INAQ16352 499 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SFT2D3Q587I9 215 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SPANXN3Q5MJ09 141 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ACER2Q5QJU3 275 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 RNASEH2BQ5TBB1 312 aaKnown RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 GTF2H2CQ6P1K8 395 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PAPD4Q6PIY7 484 aaKnown RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CRLF3Q8IUI8 442 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SLC34A3Q8N130 599 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SLC35F6Q8N357 371 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 GPATCH11Q8N954 259 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 MFSD9Q8NBP5 474 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ZNF740Q8NDX6 193 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 GRK7Q8WTQ7 553 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ITLN2Q8WWU7 325 aaPredicted RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TSLPQ969D9 159 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SNF8Q96H20 258 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ZNF354BQ96LW1 612 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SIGLEC12Q96PQ1 595 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OR4K3Q96R72 315 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 NAP1L3Q99457 506 aaPredicted RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 NPAS2Q99743 824 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PCBD2Q9H0N5 130 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 DDX47Q9H0S4 455 aaKnown RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SPNS1Q9H2V7 528 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PPANQ9NQ55 473 aaKnown RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TAS2R13Q9NYV9 303 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ABI3Q9P2A4 366 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ASIC3Q9UHC3 531 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ENTPD4Q9Y227 616 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CNTRLQ7Z7A1 2325 aa6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SPTAN1Q13813 2472 aaKnown RBP6.3□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CTAGE15A4D2H0 777 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 GABRR3A8MPY1 467 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 DNALI1O14645 258 aaPredicted RBP6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TTI1O43156 1089 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 NDUFS4O43181 175 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ZNHIT1O43257 154 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CHST10O43529 356 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 B4GALT2O60909 372 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TSPAN12O95859 305 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SLC35G6P0C7Q6 338 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ALOX12P18054 663 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SAT1P21673 171 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 HNF4AP41235 474 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CA7P43166 264 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 FNTAP49354 379 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CCR8P51685 355 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OR4D2P58180 307 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CSNK2A1P68400 391 aaPredicted RBP6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OC90Q02509 493 aaPredicted RBP6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OR1C1Q15619 314 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 EXT1Q16394 746 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 C3AR1Q16581 482 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 BAK1Q16611 211 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 MEP1AQ16819 746 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 DEFB134Q4QY38 66 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 DUPD1Q68J44 220 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SPINK14Q6IE38 97 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 H3F3CQ6NXT2 135 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 SLC46A3Q7Z3Q1 461 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CTAGE6Q86UF2 777 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TICAM1Q8IUC6 712 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CPAMD8Q8IZJ3 1885 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 KIF2BQ8N4N8 673 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 WDSUB1Q8N9V3 476 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 MDS2Q8NDY4 140 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PLPP5Q8NEB5 264 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CSNK2A3Q8NEV1 391 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 ACTRT1Q8TDG2 376 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 PIGTQ969N2 578 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 CERS2Q96G23 380 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 TSNARE1Q96NA8 513 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 LPAR4Q99677 370 aa6.29□□□□□ -1.4
DNAAF4-CCPG1-202ENST00000568310 OLFM1Q99784 485 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms