RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 FOLH1BQ9HBA9 442 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 GALNT9Q9HCQ5 603 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 LYRM4Q9HD34 91 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 GLRX2Q9NS18 164 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 FBXO34Q9NWN3 711 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 C1orf109Q9NX04 203 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 VPS29Q9UBQ0 182 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 CLEC4AQ9UMR7 237 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 TSC22D4Q9Y3Q8 395 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 NPIPA5A0A0B4J1W7 369 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 SERTM1A2A2V5 107 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 LRIT2A6NDA9 550 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 PRAMEF25A6NGN4 478 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 E7EQL1 145 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 NPIPA7E9PJI5 369 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 HRKO00198 91 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 PLPP1O14494 284 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 UBDO15205 165 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 GPR37O15354 613 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 SS18L1O75177 396 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 PPM1BO75688 479 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 SEMA3DO95025 777 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 NPIPA8P0DM63 369 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 PRPH2P23942 346 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 PTX3P26022 381 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 GSTM2P28161 218 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 HNRNPH2P55795 449 aaKnown RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 NME5P56597 212 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 DOC2BQ14184 412 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 P2RY6Q15077 328 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 PPA1Q15181 289 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 STK11Q15831 433 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 RFTN2Q52LD8 501 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 SFRP5Q5T4F7 317 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 IL23RQ5VWK5 629 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 RAET1LQ5VY80 246 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 TMEM108Q6UXF1 575 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 RBMS3Q6XE24 437 aaKnown RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 NUP54Q7Z3B4 507 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 MTDHQ86UE4 582 aaKnown RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 HOMEZQ8IX15 550 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 WDSUB1Q8N9V3 476 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 CLHC1Q8NHS4 586 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 STON2Q8WXE9 905 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 CENPKQ9BS16 269 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 REXO4Q9GZR2 422 aaKnown RBP8.56□□□□□ -1.04
CAPN3-216ENST00000567071 C12orf49Q9H741 205 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 NTN4Q9HB63 628 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 NMRK1Q9NWW6 199 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 STOML1Q9UBI4 398 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 TRIM33Q9UPN9 1127 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 SPEF1Q9Y4P9 236 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 ARFGEF3Q5TH69 2177 aa8.56□□□□□ -1.04
CAPN3-216ENST00000567071 GNG14A0A1W2PPG7 69 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 C9JVG2 144 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 PCDH7O60245 1069 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 FGF17O60258 216 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 EEDO75530 441 aaKnown RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 DCTN3O75935 186 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 AQP8O94778 261 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 GBAP04062 536 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 KLK1P06870 262 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 ABCB1P08183 1280 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 NAGAP17050 411 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 CPN2P22792 545 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 ABCD3P28288 659 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 TIA1P31483 386 aaKnown RBP eCLIP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 SSR2P43308 183 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 CLDN15P56746 228 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 STX1BP61266 288 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 PHC1P78364 1004 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 RAE1P78406 368 aaKnown RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 CUL3Q13618 768 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 PTGR1Q14914 329 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 TSC22D1Q15714 1073 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 SPRED3Q2MJR0 410 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 SPIN4Q56A73 249 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 OGFOD2Q6N063 350 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 NOXRED1Q6NXP6 359 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 COMMD6Q7Z4G1 85 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 SPATA19Q7Z5L4 167 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 OR4N5Q8IXE1 308 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 ADCY4Q8NFM4 1077 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 OR4K17Q8NGC6 315 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 RIT1Q92963 219 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 RGMAQ96B86 450 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 ERP27Q96DN0 273 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 SNX18Q96RF0 628 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 ZNF717Q9BY31 904 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 MYLK2Q9H1R3 596 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 HEATR1Q9H583 2144 aaKnown RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 SAR1AQ9NR31 198 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 AIG1Q9NVV5 245 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 HIF1ANQ9NWT6 349 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 AHSPQ9NZD4 102 aa8.55□□□□□ -1.04
CAPN3-216ENST00000567071 NOP53Q9NZM5 478 aaKnown RBP8.55□□□□□ -1.04
CAPN3-216ENST00000567071 KLHL21Q9UJP4 597 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms