RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 BCO1Q9HAY6 547 aa24.64■■□□□ 1.54
UBFD1-206ENST00000566669 SERINC1Q9NRX5 453 aa24.64■■□□□ 1.54
UBFD1-206ENST00000566669 ZDHHC2Q9UIJ5 367 aa24.64■■□□□ 1.54
UBFD1-206ENST00000566669 PCDHGB4Q9UN71 923 aa24.64■■□□□ 1.54
UBFD1-206ENST00000566669 ROS1P08922 2347 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 SPAG7O75391 227 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 STX11O75558 287 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 GCM2O75603 506 aaPredicted RBP24.63■■□□□ 1.53
UBFD1-206ENST00000566669 GUSBP08236 651 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.63■■□□□ 1.53
UBFD1-206ENST00000566669 Q71RC1 249 aaPredicted RBP24.63■■□□□ 1.53
UBFD1-206ENST00000566669 TUSC5Q8IXB3 177 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 TMCO5AQ8N6Q1 288 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 TMEM234Q8WY98 164 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 SRXN1Q9BYN0 137 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 EXD2Q9NVH0 621 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 GIMAP2Q9UG22 337 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 RNF115Q9Y4L5 304 aa24.63■■□□□ 1.53
UBFD1-206ENST00000566669 SERINC4A6NH21 518 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 EFNA2O43921 213 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 SKAP2O75563 359 aaPredicted RBP24.62■■□□□ 1.53
UBFD1-206ENST00000566669 CNOT4O95628 575 aaKnown RBP24.62■■□□□ 1.53
UBFD1-206ENST00000566669 HBA1P69905 142 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 ITGADQ13349 1161 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 ZNF141Q15928 474 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 EMBQ6PCB8 327 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 KRTCAP2Q8N6L1 136 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 VPS37AQ8NEZ2 397 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 POTEKPQ9BYX7 375 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 LAT2Q9GZY6 243 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 COQ10BQ9H8M1 238 aa24.62■■□□□ 1.53
UBFD1-206ENST00000566669 RNASET2O00584 256 aaKnown RBP24.61■■□□□ 1.53
UBFD1-206ENST00000566669 DNAJA2O60884 412 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 G6PDP11413 515 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 MATN1P21941 496 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 FKBP2P26885 142 aaKnown RBP24.61■■□□□ 1.53
UBFD1-206ENST00000566669 SHC1P29353 583 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 SOAT1P35610 550 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 RPS4XP62701 263 aaKnown RBP24.61■■□□□ 1.53
UBFD1-206ENST00000566669 QPRTQ15274 297 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 Q6ZT83 130 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 OR8J2Q8NGG1 315 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 SLC25A43Q8WUT9 341 aaPredicted RBP24.61■■□□□ 1.53
UBFD1-206ENST00000566669 TRMT61AQ96FX7 289 aaKnown RBP24.61■■□□□ 1.53
UBFD1-206ENST00000566669 ANKZF1Q9H8Y5 726 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 POLE3Q9NRF9 147 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 KCNE3Q9Y6H6 103 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 HIVEP2P31629 2446 aa24.61■■□□□ 1.53
UBFD1-206ENST00000566669 NPIPA5A0A0B4J1W7 369 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 NPIPA7E9PJI5 369 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 CD3EP07766 207 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 NPIPA8P0DM63 369 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 PGCP20142 388 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 ENPP1P22413 925 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 CCR4P51679 360 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 ATP5J2P56134 94 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 CSNK2A1P68400 391 aaPredicted RBP24.6■■□□□ 1.53
UBFD1-206ENST00000566669 PGS1Q32NB8 556 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 ARHGAP11BQ3KRB8 267 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 ATAD3BQ5T9A4 648 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 DNAJC14Q6Y2X3 702 aaPredicted RBP24.6■■□□□ 1.53
UBFD1-206ENST00000566669 EIF3MQ7L2H7 374 aaKnown RBP24.6■■□□□ 1.53
UBFD1-206ENST00000566669 C6orf120Q7Z4R8 191 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 NUDCD3Q8IVD9 361 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 LRRC34Q8IZ02 419 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 MIPOL1Q8TD10 442 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 AKAP1Q92667 903 aaKnown RBP eCLIP24.6■■□□□ 1.53
UBFD1-206ENST00000566669 FBXW5Q969U6 566 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 KLHDC3Q9BQ90 382 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 TMEM109Q9BVC6 243 aa24.6■■□□□ 1.53
UBFD1-206ENST00000566669 SPIN1Q9Y657 262 aaPredicted RBP24.6■■□□□ 1.53
UBFD1-206ENST00000566669 ZNF724A8MTY0 619 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 OIP5O43482 229 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 PPP2R2BQ00005 443 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 ZNF844Q08AG5 666 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 TOMM34Q15785 309 aaPredicted RBP24.59■■□□□ 1.53
UBFD1-206ENST00000566669 NCMAPQ5T1S8 102 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 PDZK1Q5T2W1 519 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 ANXA8L1Q5VT79 327 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 C16orf62Q7Z3J2 963 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 NUFIP2Q7Z417 695 aaKnown RBP24.59■■□□□ 1.53
UBFD1-206ENST00000566669 CIARTQ8N365 385 aaPredicted RBP24.59■■□□□ 1.53
UBFD1-206ENST00000566669 OR5AK3PQ8NH89 298 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 RFWD2Q8NHY2 731 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 SLC35G5Q96KT7 338 aa24.59■■□□□ 1.53
UBFD1-206ENST00000566669 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.59■■□□□ 1.53
UBFD1-206ENST00000566669 TYROBPO43914 113 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 CYTIPO60759 359 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 CSTAP01040 98 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 MYZAPP0CAP1 466 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 ETV4P43268 484 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 OR3A2P47893 321 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 SKP2Q13309 424 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 DPY19L1Q2PZI1 675 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 AP1ARQ63HQ0 302 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 P2RY8Q86VZ1 359 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 ATP6V1C2Q8NEY4 427 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 OR5D16Q8NGK9 328 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 PSD2Q9BQI7 771 aa24.58■■□□□ 1.53
UBFD1-206ENST00000566669 ZNF350Q9GZX5 532 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms