RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SELENBP1Q13228 472 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 CBFBQ13951 182 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 CAPRIN1Q14444 709 aaKnown RBP10.63□□□□□ -0.71
UBR1-206ENST00000566493 PGS1Q32NB8 556 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 NUFIP2Q7Z417 695 aaKnown RBP10.63□□□□□ -0.71
UBR1-206ENST00000566493 SLC43A2Q8N370 569 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 KRTCAP2Q8N6L1 136 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 GPR119Q8TDV5 335 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 ZFP90Q8TF47 636 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 HSD17B8Q92506 261 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 AKAP1Q92667 903 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBR1-206ENST00000566493 C3orf30Q96M34 536 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 OR7D2Q96RA2 312 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 USB1Q9BQ65 265 aaKnown RBP10.63□□□□□ -0.71
UBR1-206ENST00000566493 KLHDC3Q9BQ90 382 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 SRXN1Q9BYN0 137 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 ESRP2Q9H6T0 727 aaKnown RBP10.63□□□□□ -0.71
UBR1-206ENST00000566493 L2HGDHQ9H9P8 463 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 GPATCH2Q9NW75 528 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 ZDHHC2Q9UIJ5 367 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 KCNE3Q9Y6H6 103 aa10.63□□□□□ -0.71
UBR1-206ENST00000566493 CLOCKO15516 846 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 EFNA2O43921 213 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 CYP7B1O75881 506 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 AK1P00568 194 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 ADAP00813 363 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 FESP07332 822 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 CD3EP07766 207 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 NUDT17P0C025 328 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 MATN1P21941 496 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 PCSK6P29122 969 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 RAC3P60763 192 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 RPS4XP62701 263 aaKnown RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 P2RY6Q15077 328 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 TSC22D1Q15714 1073 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 TOMM34Q15785 309 aaPredicted RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 NDUFAF6Q330K2 333 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.62□□□□□ -0.71
UBR1-206ENST00000566493 SFRP5Q5T4F7 317 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 TFAP2EQ6VUC0 442 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 GABRG1Q8N1C3 465 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 OR5W2Q8NH69 310 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 OR5AK3PQ8NH89 298 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 KISS1RQ969F8 398 aaPredicted RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 SDF2Q99470 211 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 TMEM204Q9BSN7 226 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 ROPN1BQ9BZX4 212 aaPredicted RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 ANKZF1Q9H8Y5 726 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 ROPN1Q9HAT0 212 aaPredicted RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 SERINC1Q9NRX5 453 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 ZNF701Q9NV72 531 aaPredicted RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 KLHL9Q9P2J3 617 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 LGALS13Q9UHV8 139 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 PCDHGB4Q9UN71 923 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 LAMP3Q9UQV4 416 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
UBR1-206ENST00000566493 NUP214P35658 2090 aaPredicted RBP10.62□□□□□ -0.71
UBR1-206ENST00000566493 IGHV3-15A0A0B4J1V0 119 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 SERINC4A6NH21 518 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 NPIPB9F8W1W9 429 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 STX11O75558 287 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 GCM2O75603 506 aaPredicted RBP10.61□□□□□ -0.71
UBR1-206ENST00000566493 NTN1O95631 604 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 BPGMP07738 259 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 G6PDP11413 515 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 NID1P14543 1247 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 ENPP1P22413 925 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 CLDN8P56748 225 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 HBA1P69905 142 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 EMX2Q04743 252 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 ZNF844Q08AG5 666 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 RASGEF1BQ0VAM2 473 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 ITGADQ13349 1161 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 QPRTQ15274 297 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 GPR68Q15743 365 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 SLC25A53Q5H9E4 307 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 PDZK1Q5T2W1 519 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 ADAM5Q6NVV9 412 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 BHLHA15Q7RTS1 189 aaPredicted RBP10.61□□□□□ -0.71
UBR1-206ENST00000566493 C16orf62Q7Z3J2 963 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 C6orf120Q7Z4R8 191 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 NUDCD3Q8IVD9 361 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 RIMKLAQ8IXN7 391 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 ZNF619Q8N2I2 560 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 OR5D16Q8NGK9 328 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 RAB3IL1Q8TBN0 382 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 IGFBPL1Q8WX77 278 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 TMEM234Q8WY98 164 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 FBXW5Q969U6 566 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 TRMT61AQ96FX7 289 aaKnown RBP10.61□□□□□ -0.71
UBR1-206ENST00000566493 SLC35G5Q96KT7 338 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 OR5B2Q96R09 309 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 THUMPD3Q9BV44 507 aaKnown RBP10.61□□□□□ -0.71
UBR1-206ENST00000566493 NMUR2Q9GZQ4 415 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 LAT2Q9GZY6 243 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 COQ10BQ9H8M1 238 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 EXD2Q9NVH0 621 aa10.61□□□□□ -0.71
UBR1-206ENST00000566493 NOP53Q9NZM5 478 aaKnown RBP10.61□□□□□ -0.71
UBR1-206ENST00000566493 RNF103-CHMP3A0A140T963 221 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms