RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CEP295Q9C0D2 2601 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 KLK10O43240 276 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 GMFGO60234 142 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 OR10H3O60404 316 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 NUDT14O95848 222 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 IGFBP5P24593 272 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-213ENST00000565834 PTGDSP41222 190 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 IDH2P48735 452 aaKnown RBP17.11■□□□□ 0.33
COMMD4-213ENST00000565834 SNTA1Q13424 505 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 CBFBQ13951 182 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 WBP2NLQ6ICG8 309 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 ULK3Q6PHR2 472 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 ZNF730Q6ZMV8 503 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 RTL4Q6ZR62 310 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 NKAIN4Q8IVV8 208 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 APLFQ8IW19 511 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-213ENST00000565834 CYP4Z2PQ8N1L4 340 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 OR5W2Q8NH69 310 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 PAQR8Q8TEZ7 354 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 ACOT11Q8WXI4 607 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-213ENST00000565834 HHATLQ9HCP6 504 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 PPP4R1LQ9P1A2 415 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 C15orf41Q9Y2V0 281 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 CNTRLQ7Z7A1 2325 aa17.11■□□□□ 0.33
COMMD4-213ENST00000565834 A0A087WUU8 490 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 C2orf72A6NCS6 295 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 DLGAP1O14490 977 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CHP2O43745 196 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 LYPD3O95274 346 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CCL3P10147 92 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 PGCP20142 388 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 HLCSP50747 726 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 COL28A1Q2UY09 1125 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 RFX4Q33E94 735 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 ALG10BQ5I7T1 473 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 PRAMEF20Q5VT98 475 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SLC22A10Q63ZE4 541 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 KDM4DQ6B0I6 523 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 ZNF770Q6IQ21 691 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SLC30A6Q6NXT4 461 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 RRM2BQ7LG56 351 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 AQP11Q8NBQ7 271 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 OR4K5Q8NGD3 323 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 ZNF563Q8TA94 476 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SNIP1Q8TAD8 396 aaKnown RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 DNAJA4Q8WW22 397 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 RDH12Q96NR8 316 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CCNL2Q96S94 520 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 PRSS27Q9BQR3 290 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 DPH1Q9BZG8 443 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 ING2Q9H160 280 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SH2D2AQ9NP31 389 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 KRT84Q9NSB2 600 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 ANKRD10Q9NXR5 420 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 TMEFF2Q9UIK5 374 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SNAP29O95721 258 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CBLP22681 906 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CASRP41180 1078 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CYB561P49447 251 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 RAD23AP54725 363 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SUMO3P55854 103 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SOX8P57073 446 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 IL1RL1Q01638 556 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 TAF11Q15544 211 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 SWT1Q5T5J6 900 aaKnown RBP17.1■□□□□ 0.33
COMMD4-213ENST00000565834 OR5M10Q6IEU7 315 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 TMEM255BQ8WV15 326 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 ZNF556Q9HAH1 456 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CPNE5Q9HCH3 593 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 CNIH4Q9P003 139 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 MGAT4BQ9UQ53 548 aa17.1■□□□□ 0.33
COMMD4-213ENST00000565834 NTN1O95631 604 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 MSX1P28360 303 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 IFNGR2P38484 337 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 ID4P47928 161 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 UGT2B15P54855 530 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 OC90Q02509 493 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-213ENST00000565834 GALNT5Q7Z7M9 940 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 C3orf49Q96BT1 292 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 KLHDC3Q9BQ90 382 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 ANGPTL4Q9BY76 406 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 GPR83Q9NYM4 423 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 RAB26Q9ULW5 256 aa17.09■□□□□ 0.33
COMMD4-213ENST00000565834 IGLV3-32A0A0A0MS00 114 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 ANKUB1A6NFN9 424 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 A6NL46 340 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 MITFO75030 526 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-213ENST00000565834 APC2O95996 2303 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 ADAP00813 363 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 GASTP01350 101 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 CDH2P19022 906 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-213ENST00000565834 SLC1A3P43003 542 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 RAPSNQ13702 412 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 ZIK1Q3SY52 487 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-213ENST00000565834 NHSL2Q5HYW2 709 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 C6orf52Q5T4I8 152 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.32
COMMD4-213ENST00000565834 PGBD2Q6P3X8 592 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms