RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PEX2P28328 305 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 IFNA8P32881 189 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 CYB561P49447 251 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 CDH12P55289 794 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 SOX8P57073 446 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 OC90Q02509 493 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF117Q03924 483 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 EPS8Q12929 822 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ENTPD8Q5MY95 495 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 PRAMEF20Q5VT98 475 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 AGAP7PQ5VUJ5 663 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 LPCAT4Q643R3 524 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 BICRALQ6AI39 1079 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 RTL4Q6ZR62 310 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 LINC00696Q6ZRV3 163 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 OFCC1Q8IZS5 231 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 CYP4Z2PQ8N1L4 340 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 C9orf43Q8TAL5 461 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 PAQR8Q8TEZ7 354 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 PHF10Q8WUB8 498 aaKnown RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 NRG4Q8WWG1 115 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 NR4A3Q92570 626 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 EME1Q96AY2 570 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ARSGQ96EG1 525 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ABHD17AQ96GS6 310 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 SH3YL1Q96HL8 342 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 SGCZQ96LD1 299 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 AGAP4Q96P64 663 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF559Q9BR84 538 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 FNDC11Q9BVV2 318 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 POLR2J2Q9GZM3 115 aaKnown RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 LAT2Q9GZY6 243 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 POLR2J3Q9H1A7 115 aaKnown RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 NTN4Q9HB63 628 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 GALNT9Q9HCQ5 603 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ANKRD10Q9NXR5 420 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 VNN3Q9NY84 501 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 RHCGQ9UBD6 479 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 ACAD8Q9UKU7 415 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 CNOT11Q9UKZ1 510 aaKnown RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 A4GNTQ9UNA3 340 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 NTNG1Q9Y2I2 539 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-205ENST00000564899 CELSR1Q9NYQ6 3014 aa10.12□□□□□ -0.79
SF3B3-205ENST00000564899 A1L4Q6 167 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 C17orf51A8MQB3 221 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TNFRSF11BO00300 401 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 ADAM10O14672 748 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 ADAM11O75078 769 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 OR5F1O95221 314 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 GADD45GO95257 159 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 H1F0P07305 194 aaKnown RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CCL3P10147 92 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 UQCRBP14927 111 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 FPR1P21462 350 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 DNAJA1P31689 397 aaKnown RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 RYKP34925 604 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 PTGDSP41222 190 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CASP3P42574 277 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 ACAA2P42765 397 aaKnown RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SLC6A8P48029 635 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 PTDSS1P48651 473 aaKnown RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CCL11P51671 97 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 IST1P53990 364 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 GAS1P54826 345 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SMIM11AP58511 58 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 C17orf67Q0P5P2 114 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 FOXD4Q12950 439 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 PPP1R8Q12972 351 aaKnown RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SNTA1Q13424 505 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 PIN1Q13526 163 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TUBA3CQ13748 450 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 OR1Q1Q15612 314 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 LRRC36Q1X8D7 754 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 FGD3Q5JSP0 725 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 OGFRL1Q5TC84 451 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TMEM81Q6P7N7 255 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TUBA3EQ6PEY2 450 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CBLN3Q6UW01 205 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 ISLR2Q6UXK2 745 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TSPYL5Q86VY4 417 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CADM2Q8N3J6 435 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SVOPLQ8N434 492 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 PIK3C3Q8NEB9 887 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 OR52J3Q8NH60 311 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 B4GALNT2Q8NHY0 566 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 DUSP19Q8WTR2 217 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SDCCAG3Q96C92 435 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SLC41A3Q96GZ6 507 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 DHRS1Q96LJ7 313 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CIB1Q99828 191 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 UTP23Q9BRU9 249 aaKnown RBP10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TRIM2Q9C040 744 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 TMEM27Q9HBJ8 222 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SH2D2AQ9NP31 389 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 SDHAF3Q9NRP4 125 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 CNIH4Q9P003 139 aa10.11□□□□□ -0.79
SF3B3-205ENST00000564899 PPP4R1LQ9P1A2 415 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms