RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KLHL15Q96M94 604 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 TRNT1Q96Q11 434 aaKnown RBP16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 RNF122Q9H9V4 155 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 SLC35A3Q9Y2D2 325 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 UQCRHLA0A096LP55 91 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 A0A0J9YW62 118 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 CENPVL1A0A0U1RR11 272 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 TUBAL3A6NHL2 446 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 A8MXE2 369 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 ADAMDEC1O15204 470 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 CXCL13O43927 109 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 PLGP00747 810 aaPredicted RBP16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 NR2F1P10589 423 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 PRKCAP17252 672 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 PGCP20142 388 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 IL11P20809 199 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 CRATP43155 626 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 MAGEA8P43361 318 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 CARD18P57730 90 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 KRTAP10-9P60411 292 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 SIRPAP78324 504 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 KCNJ10P78508 379 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 SKP2Q13309 424 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 CTU2Q2VPK5 515 aaKnown RBP16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 ANKFN1Q8N957 763 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 ATP6V1C2Q8NEY4 427 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 FAM222BQ8WU58 562 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 TMEM234Q8WY98 164 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 OSTF1Q92882 214 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 ZG16BQ96DA0 208 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 STARD4Q96DR4 205 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 ADGRG7Q96K78 797 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 TIGARQ9NQ88 270 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 SLC6A13Q9NSD5 602 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 CRIM1Q9NZV1 1036 aa16.47■□□□□ 0.23
SYNGR3-204ENST00000564642 PRAMEF27A3QJZ7 478 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 MSTNO14793 375 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 AQP8O94778 261 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 PGM1P36871 562 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 KIR2DL2P43627 348 aaPredicted RBP16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 MRPL19P49406 292 aaKnown RBP16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 SORDQ00796 357 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 TMEM176BQ3YBM2 270 aaPredicted RBP16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 GTF2IRD2BQ6EKJ0 949 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 VWA1Q6PCB0 445 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 LRRC74BQ6ZQY2 392 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 HMGN2P46Q86SG4 172 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 GTF2IRD2Q86UP8 949 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 REXO5Q96IC2 774 aaKnown RBP16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 MTHFD2LQ9H903 347 aaPredicted RBP16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 TPT1P8Q9HAU6 139 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 GALNT8Q9NY28 637 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 P2RX2Q9UBL9 471 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 ADGRG4Q8IZF6 3080 aa16.46■□□□□ 0.23
SYNGR3-204ENST00000564642 EFNA2O43921 213 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 CHRM4P08173 479 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 CPOXP36551 454 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC6A8P48029 635 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 CTBP2P56545 445 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 IRX1P78414 480 aaPredicted RBP16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 SELENBP1Q13228 472 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC25A53Q5H9E4 307 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC2A7Q6PXP3 512 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 BTLAQ7Z6A9 289 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 ARFGAP2Q8N6H7 521 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF563Q8TA94 476 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 LINC01560Q8TB33 94 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 ST8SIA1Q92185 356 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 GTF2H4Q92759 462 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 PMM1Q92871 262 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 THOC1Q96FV9 657 aaKnown RBP16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 QRSL1Q9H0R6 528 aaKnown RBP16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC38A1Q9H2H9 487 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 SERINC1Q9NRX5 453 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 CALML5Q9NZT1 146 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 CCDC167Q9P0B6 97 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 EMC9Q9Y3B6 208 aa16.45■□□□□ 0.22
SYNGR3-204ENST00000564642 TMEM247A6NEH6 219 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 AGAP5A6NIR3 686 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 DNAJA2O60884 412 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 NTN1O95631 604 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 EPXP11678 715 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 ETFAP13804 333 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 IL7RP16871 459 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 SHC1P29353 583 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 RYKP34925 604 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 SESN3P58005 492 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 DSTNP60981 165 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 GNA13Q14344 377 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 GTDC1Q4AE62 458 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 FAM214BQ7L5A3 538 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 CMIPQ8IY22 773 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 PEX5LQ8IYB4 626 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 CPNE4Q96A23 557 aaPredicted RBP16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 ZNF524Q96C55 264 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 GMPPAQ96IJ6 420 aaPredicted RBP16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 SLC39A3Q9BRY0 314 aa16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 OPN3Q9H1Y3 402 aaPredicted RBP16.44■□□□□ 0.22
SYNGR3-204ENST00000564642 RAD21L1Q9H4I0 556 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms