RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SUCLG1P53597 346 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 CRYBB1P53674 252 aaPredicted RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 PRMT2P55345 433 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SSX2Q16385 188 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 PPP1R3AQ16821 1122 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 CNPY1Q3B7I2 92 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 C6orf226Q5I0X4 101 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 UFSP1Q6NVU6 142 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 FAM199XQ6PEV8 388 aaPredicted RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 DHDDSQ86SQ9 333 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SLC47A2Q86VL8 602 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 C9orf40Q8IXQ3 194 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 OR4Q3Q8NH05 313 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 C10orf35Q96D05 121 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 PPP1R16AQ96I34 528 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 RPRD1AQ96P16 312 aaPredicted RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 SLC38A2Q96QD8 506 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 PSMB7Q99436 277 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 PLIN2Q99541 437 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 RBM4BQ9BQ04 359 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 TRIM51Q9BSJ1 452 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SMYD3Q9H7B4 428 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 YY1AP1Q9H869 796 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 ZFP14Q9HCL3 533 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SPATA7Q9P0W8 599 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 RIMS3Q9UJD0 308 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 CA5BQ9Y2D0 317 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 LOC100131303A0A0U1RQF7 123 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 GOLGA8OA6NCC3 632 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 FAM47DPA6NHR8 397 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 GOLGA8NF8WBI6 632 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 KLHL41O60662 606 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 GALR3O60755 368 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 RAMP3O60896 148 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 CABYRO75952 493 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 HSMCR30P0CW71 290 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 SERPINA2P20848 420 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 ACVR1BP36896 505 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 MAP3K8P41279 467 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 HNRNPA3P51991 378 aaKnown RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 RPS14P62263 151 aaKnown RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 TRIM69Q86WT6 500 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 ECHDC2Q86YB7 292 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 CSNK1A1LQ8N752 337 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 FAM83FQ8NEG4 500 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 OR9K2Q8NGE7 335 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 OR6T1Q8NGN1 323 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 TCEANC2Q96MN5 208 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 ROPN1BQ9BZX4 212 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 PNO1Q9NRX1 252 aaKnown RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 NUDT15Q9NV35 164 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 SPRR3Q9UBC9 169 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 SEC14L3Q9UDX4 400 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 TMED5Q9Y3A6 229 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 SHISA9B4DS77 424 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 E9PQ18 207 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 CDX4O14627 284 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 LINC01565O15544 149 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 SCRG1O75711 98 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 KBTBD11O94819 623 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 PIGRP01833 764 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 NMT1P30419 496 aaKnown RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 EPS15P42566 896 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 PRRX1P54821 245 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 TGIF1Q15583 401 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 PDZK1Q5T2W1 519 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 OR2A2Q6IF42 318 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 C17orf82Q86X59 251 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 EGFL6Q8IUX8 553 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 CCDC50Q8IVM0 306 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 ALLCQ8N6M5 410 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 OR1L4Q8NGR5 311 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 UBE2E3Q969T4 207 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 EFHD2Q96C19 240 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 ZBED6CLQ96FA7 236 aaPredicted RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 COPS8Q99627 209 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 KRTAP1-5Q9BYS1 174 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 TIGARQ9NQ88 270 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 POLE4Q9NR33 117 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 RAB20Q9NX57 234 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 ZNF581Q9P0T4 197 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 PRODH2Q9UF12 536 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 SLC2A6Q9UGQ3 507 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 PRPF19Q9UMS4 504 aaKnown RBP2.01□□□□□ -2.09
CHD9-209ENST00000564255 STYXL1Q9Y6J8 313 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 PRSS21Q9Y6M0 314 aa2.01□□□□□ -2.09
CHD9-209ENST00000564255 E9PLD3 99 aa2□□□□□ -2.09
CHD9-209ENST00000564255 LRRTM2O43300 516 aa2□□□□□ -2.09
CHD9-209ENST00000564255 UPK3AO75631 287 aa2□□□□□ -2.09
CHD9-209ENST00000564255 CLDN9O95484 217 aa2□□□□□ -2.09
CHD9-209ENST00000564255 AP2A1O95782 977 aa2□□□□□ -2.09
CHD9-209ENST00000564255 POLR2EP19388 210 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 IDSP22304 550 aa2□□□□□ -2.09
CHD9-209ENST00000564255 RPL13AP40429 203 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 OPRD1P41143 372 aa2□□□□□ -2.09
CHD9-209ENST00000564255 STARP49675 285 aa2□□□□□ -2.09
CHD9-209ENST00000564255 HSPA2P54652 639 aa2□□□□□ -2.09
CHD9-209ENST00000564255 HMGCS2P54868 508 aa2□□□□□ -2.09
CHD9-209ENST00000564255 MRPS11P82912 194 aaKnown RBP2□□□□□ -2.09
CHD9-209ENST00000564255 PAX2Q02962 417 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms