RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 A0A087WZY1 265 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 A0A1B0GWA3 101 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 ARRDC5A6NEK1 342 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 G3V2T6 193 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 MKRN2OSH3BPM6 223 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 CDC40O60508 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLK3-214ENST00000564096 CCNB2O95067 398 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 PNMTP11086 282 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 GP1BBP13224 206 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 VHLP40337 213 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 PTGDSP41222 190 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 ACAA2P42765 397 aaKnown RBP11.69□□□□□ -0.54
CLK3-214ENST00000564096 HTR3AP46098 478 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 PTDSS1P48651 473 aaKnown RBP11.69□□□□□ -0.54
CLK3-214ENST00000564096 IDH2P48735 452 aaKnown RBP11.69□□□□□ -0.54
CLK3-214ENST00000564096 OGFRL1Q5TC84 451 aaPredicted RBP11.69□□□□□ -0.54
CLK3-214ENST00000564096 CBLN3Q6UW01 205 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 RRM2BQ7LG56 351 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 TSEN54Q7Z6J9 526 aaKnown RBP11.69□□□□□ -0.54
CLK3-214ENST00000564096 PLCZ1Q86YW0 608 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 OR1J4Q8NGS1 313 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 OR52J3Q8NH60 311 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 ST8SIA1Q92185 356 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
CLK3-214ENST00000564096 FRMD6Q96NE9 622 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 ALPK1Q96QP1 1244 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 CIB1Q99828 191 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 FAM173AQ9BQD7 235 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 WFDC6Q9BQY6 131 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 GABARAPL1Q9H0R8 117 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 C12orf10Q9HB07 376 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 TAS2R10Q9NYW0 307 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 RHCGQ9UBD6 479 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 DKKL1Q9UK85 242 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 SLC7A7Q9UM01 511 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 PCDHGB7Q9Y5F8 929 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 PCDHGB6Q9Y5F9 930 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
CLK3-214ENST00000564096 A0A087WV48 116 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 FFAR1O14842 300 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 OIP5O43482 229 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 GMFGO60234 142 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 NME2P1O60361 137 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 NEURL1O76050 574 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 HPRP00739 348 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 F10P00742 488 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 NME2P22392 152 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 RBM34P42696 430 aaKnown RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 SLC1A3P43003 542 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 QPRTQ15274 297 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 EXOC3L2Q2M3D2 409 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 SPINK14Q6IE38 97 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 IGFL2Q6UWQ7 119 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 ZNF730Q6ZMV8 503 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 ZBTB49Q6ZSB9 765 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 GDF7Q7Z4P5 450 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 MDGA2Q7Z553 956 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 FAM98AQ8NCA5 519 aaKnown RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 MDS2Q8NDY4 140 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 OR10G2Q8NGC3 310 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 OR4C15Q8NGM1 316 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 ACOT11Q8WXI4 607 aaPredicted RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 DNAJC9Q8WXX5 260 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 HAS2Q92819 552 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 ZBTB8AQ96BR9 441 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 HS6ST2Q96MM7 605 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 SMAD5Q99717 465 aaKnown RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 RBM4BQ9BQ04 359 aaKnown RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 RBM4Q9BWF3 364 aaKnown RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 RTN4RQ9BZR6 473 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 KLHL4Q9C0H6 718 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 ZNF556Q9HAH1 456 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 NTN4Q9HB63 628 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 ACER3Q9NUN7 267 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 PDP1Q9P0J1 537 aaPredicted RBP11.68□□□□□ -0.54
CLK3-214ENST00000564096 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 EXPH5Q8NEV8 1989 aa11.68□□□□□ -0.54
CLK3-214ENST00000564096 SPTBN2O15020 2390 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 TRAV17A0A0B4J275 112 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 ELOA3DA6NLF2 546 aaPredicted RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 G3V3Y1 287 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 KLRC4-KLRK1H3BQV0 150 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ACOT7O00154 380 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 GNB5O14775 395 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 PEX1O43933 1283 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 OR10H3O60404 316 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 TPST2O60704 377 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 SEMA7AO75326 666 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 TRIM3O75382 744 aaPredicted RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 RASAL1O95294 804 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 CAPNS1P04632 268 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 ITGB2P05107 769 aa11.67□□□□□ -0.54
CLK3-214ENST00000564096 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
CLK3-214ENST00000564096 CNR1P21554 472 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms