RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 TNFSF13O75888 250 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 UBTFL6P0CB48 400 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-207ENST00000564060 CHRNEQ04844 493 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 SQLEQ14534 574 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 QPRTQ15274 297 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 NDUFAF6Q330K2 333 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 HBMQ6B0K9 141 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 FAM71CQ8NEG0 241 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 ADGRG7Q96K78 797 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 LURAP1Q96LR2 239 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 NPAS1Q99742 590 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 THUMPD3Q9BV44 507 aaKnown RBP17.84■□□□□ 0.45
CMTM3-207ENST00000564060 TMEM185BQ9H7F4 350 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 MTHFD2LQ9H903 347 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-207ENST00000564060 EXOSC3Q9NQT5 275 aaKnown RBP17.84■□□□□ 0.45
CMTM3-207ENST00000564060 GLRX2Q9NS18 164 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 TRIM33Q9UPN9 1127 aa17.84■□□□□ 0.45
CMTM3-207ENST00000564060 ETV2O00321 342 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 TNFSF11O14788 317 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 EDF1O60869 148 aaKnown RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 DNAJA2O60884 412 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 PLGP00747 810 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 PABPC4LP0CB38 370 aaKnown RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 SFTPDP35247 375 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 PGM1P36871 562 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 CRATP43155 626 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 SLC6A8P48029 635 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 DSTNP60981 165 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 KCNJ10P78508 379 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 MAPK14Q16539 360 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 SYPL1Q16563 259 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 CTU2Q2VPK5 515 aaKnown RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 HSP90B2PQ58FF3 399 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 COX20Q5RI15 118 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 GTF2IRD2BQ6EKJ0 949 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 C3orf33Q6P1S2 294 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 BLOC1S3Q6QNY0 202 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 OLIG3Q7RTU3 272 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 LUZP2Q86TE4 346 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 GTF2IRD2Q86UP8 949 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 FAM222BQ8WU58 562 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 GTF2H4Q92759 462 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 CPNE4Q96A23 557 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 SPDL1Q96EA4 605 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 REXO5Q96IC2 774 aaKnown RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 KLHDC3Q9BQ90 382 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 SLC38A1Q9H2H9 487 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 CACYBPQ9HB71 228 aaKnown RBP17.83■□□□□ 0.44
CMTM3-207ENST00000564060 SERINC1Q9NRX5 453 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 CCDC167Q9P0B6 97 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 MPDZO75970 2070 aa17.83■□□□□ 0.44
CMTM3-207ENST00000564060 ANKHD1Q8IWZ3 2542 aaKnown RBP17.82■□□□□ 0.44
CMTM3-207ENST00000564060 APCP25054 2843 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 ABCA12Q86UK0 2595 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 A0A0J9YW62 118 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 CENPVL1A0A0U1RR11 272 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 PRAMEF27A3QJZ7 478 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 TUBAL3A6NHL2 446 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 A8MXE2 369 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 NR5A2O00482 541 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 CXCL13O43927 109 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 NTN1O95631 604 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 DBIP07108 87 aaKnown RBP17.82■□□□□ 0.44
CMTM3-207ENST00000564060 IL7RP16871 459 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 PCYT1AP49585 367 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 CRISP3P54108 245 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 FADDQ13158 208 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 TOMM34Q15785 309 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-207ENST00000564060 PEX5LQ8IYB4 626 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 ANKFN1Q8N957 763 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 ZNF563Q8TA94 476 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 WDR60Q8WVS4 1066 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 GMPPAQ96IJ6 420 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-207ENST00000564060 SLC6A13Q9NSD5 602 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 EMC9Q9Y3B6 208 aa17.82■□□□□ 0.44
CMTM3-207ENST00000564060 SPIN1Q9Y657 262 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-207ENST00000564060 TEX15Q9BXT5 2789 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 A0A096LPI6 279 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 AGAP5A6NIR3 686 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 SMNDC1O75940 238 aaKnown RBP eCLIP17.81■□□□□ 0.44
CMTM3-207ENST00000564060 CHRM4P08173 479 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 UQCRBP14927 111 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 PPIBP23284 216 aaKnown RBP17.81■□□□□ 0.44
CMTM3-207ENST00000564060 SLC7A1P30825 629 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 CPOXP36551 454 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 CARD18P57730 90 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 SIRPAP78324 504 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 SLC2A7Q6PXP3 512 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 FAM214BQ7L5A3 538 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 TMEM200AQ86VY9 491 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 SLC25A43Q8WUT9 341 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-207ENST00000564060 OSTF1Q92882 214 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 STARD4Q96DR4 205 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 PAIP1Q9H074 479 aaKnown RBP17.81■□□□□ 0.44
CMTM3-207ENST00000564060 GALNT8Q9NY28 637 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 CRIM1Q9NZV1 1036 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 PCDHB14Q9Y5E9 798 aa17.81■□□□□ 0.44
CMTM3-207ENST00000564060 CLIC1O00299 241 aa17.8■□□□□ 0.44
CMTM3-207ENST00000564060 AQP8O94778 261 aa17.8■□□□□ 0.44
CMTM3-207ENST00000564060 GOSR1O95249 250 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms