RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CROCCP2Q86T23 111 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 GTF2IRD2Q86UP8 949 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 OR5W2Q8NH69 310 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 ZFP90Q8TF47 636 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 CPNE4Q96A23 557 aaPredicted RBP15.79■□□□□ 0.12
NME3-205ENST00000563854 MRGPRX4Q96LA9 322 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 HS3ST6Q96QI5 342 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 THUMPD3Q9BV44 507 aaKnown RBP15.79■□□□□ 0.12
NME3-205ENST00000563854 NMUR2Q9GZQ4 415 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 MARCOQ9UEW3 520 aaPredicted RBP15.79■□□□□ 0.12
NME3-205ENST00000563854 ABCA4P78363 2273 aa15.79■□□□□ 0.12
NME3-205ENST00000563854 NUP214P35658 2090 aaPredicted RBP15.79■□□□□ 0.12
NME3-205ENST00000563854 SETD2Q9BYW2 2564 aaPredicted RBP15.78■□□□□ 0.12
NME3-205ENST00000563854 IGHV3-15A0A0B4J1V0 119 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 PRSS51A0A1B0GVH4 220 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 A0A1W2PNR3 127 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 ESPNB1AK53 854 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 EIF4E2O60573 245 aaKnown RBP15.78■□□□□ 0.12
NME3-205ENST00000563854 PABPC4LP0CB38 370 aaKnown RBP15.78■□□□□ 0.12
NME3-205ENST00000563854 KITP10721 976 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 S100A3P33764 101 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 KHKP50053 298 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 CLNS1AP54105 237 aaKnown RBP15.78■□□□□ 0.12
NME3-205ENST00000563854 PHC1P78364 1004 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 TNFAIP8L3Q5GJ75 292 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 STAC2Q6ZMT1 411 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 BEND4Q6ZU67 534 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 WFDC8Q8IUA0 241 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 WFDC11Q8NEX6 87 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 RNF128Q8TEB7 428 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 TESCQ96BS2 214 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 ZNF524Q96C55 264 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 SLC35A5Q9BS91 424 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 ZNF350Q9GZX5 532 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 QRSL1Q9H0R6 528 aaKnown RBP15.78■□□□□ 0.12
NME3-205ENST00000563854 COQ10BQ9H8M1 238 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 MEAF6Q9HAF1 191 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 FANCFQ9NPI8 374 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 BEX4Q9NWD9 120 aaPredicted RBP15.78■□□□□ 0.12
NME3-205ENST00000563854 KCNE5Q9UJ90 142 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 HAO1Q9UJM8 370 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 WDR45Q9Y484 360 aa15.78■□□□□ 0.12
NME3-205ENST00000563854 MAP1AP78559 2803 aaPredicted RBP15.77■□□□□ 0.12
NME3-205ENST00000563854 GOLGA8QA0A0J9YX86 632 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 TMEM120BA0PK00 339 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 GOLGA8OA6NCC3 632 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 GOLGA8NF8WBI6 632 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 ANKRD28O15084 1053 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 UGT2B17O75795 530 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 NTN1O95631 604 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 ALDOCP09972 364 aaKnown RBP15.77■□□□□ 0.12
NME3-205ENST00000563854 UFM1P61960 85 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 HPCAP84074 193 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 SKP2Q13309 424 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 ZNF141Q15928 474 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 DPY19L1Q2PZI1 675 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 GPAT3Q53EU6 434 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 FCRLAQ7L513 359 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 TUSC5Q8IXB3 177 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 OR5B2Q96R09 309 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 ACTR6Q9GZN1 396 aa15.77■□□□□ 0.12
NME3-205ENST00000563854 MTORP42345 2549 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 SDHDO14521 159 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 KIAA0513O60268 411 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 SCN2BO60939 215 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 AGR2O95994 175 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 THBDP07204 575 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 NKX6-1P78426 367 aaPredicted RBP15.76■□□□□ 0.11
NME3-205ENST00000563854 MERTKQ12866 999 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 CASP8Q14790 479 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 RNPS1Q15287 305 aaKnown RBP15.76■□□□□ 0.11
NME3-205ENST00000563854 MAPK14Q16539 360 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 TIGD2Q4W5G0 525 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 SAXO2Q658L1 398 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 NXNQ6DKJ4 435 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 C3orf33Q6P1S2 294 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 EIF3MQ7L2H7 374 aaKnown RBP15.76■□□□□ 0.11
NME3-205ENST00000563854 NUFIP2Q7Z417 695 aaKnown RBP15.76■□□□□ 0.11
NME3-205ENST00000563854 MIPOL1Q8TD10 442 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 ARL8AQ96BM9 186 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 ROPN1LQ96C74 230 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 TEX37Q96LM6 180 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 CCL19Q99731 98 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 LAT2Q9GZY6 243 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 WDR55Q9H6Y2 383 aaPredicted RBP15.76■□□□□ 0.11
NME3-205ENST00000563854 AIG1Q9NVV5 245 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 KLHL13Q9P2N7 655 aa15.76■□□□□ 0.11
NME3-205ENST00000563854 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.75■□□□□ 0.11
NME3-205ENST00000563854 SMPD2O60906 423 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 PRKD3O94806 890 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 C1QCP02747 245 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 PPP3CBP16298 524 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 PGCP20142 388 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 ENPP1P22413 925 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 EPHA3P29320 983 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 RYKP34925 604 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 WDR4P57081 412 aaKnown RBP15.75■□□□□ 0.11
NME3-205ENST00000563854 SESN3P58005 492 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 FUT5Q11128 374 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 TSC22D1Q15714 1073 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms