RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CLIC3O95833 236 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 NUDT14O95848 222 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 LSM11P83369 360 aaKnown RBP eCLIP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 PDK3Q15120 406 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ZNF791Q3KP31 576 aaPredicted RBP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 DCAF10Q5QP82 559 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 KRT80Q6KB66 452 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ULK3Q6PHR2 472 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 IL20RBQ6UXL0 311 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ARMC10Q8N2F6 343 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ZNF563Q8TA94 476 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 PIGXQ8TBF5 258 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 BRIX1Q8TDN6 353 aaKnown RBP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 THOC3Q96J01 351 aaKnown RBP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 PRSS27Q9BQR3 290 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 GALNT9Q9HCQ5 603 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 KRCC1Q9NPI7 259 aaPredicted RBP20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ENOPH1Q9UHY7 261 aa20.07■□□□□ 0.8
LINC01960-201ENST00000563759 ITPKBP27987 946 aa20.06■□□□□ 0.8
LINC01960-201ENST00000563759 POLR2IP36954 125 aaKnown RBP20.06■□□□□ 0.8
LINC01960-201ENST00000563759 IDH2P48735 452 aaKnown RBP20.06■□□□□ 0.8
LINC01960-201ENST00000563759 TPD52P55327 224 aaPredicted RBP20.06■□□□□ 0.8
LINC01960-201ENST00000563759 FOXC1Q12948 553 aa20.06■□□□□ 0.8
LINC01960-201ENST00000563759 WDR88Q6ZMY6 472 aa20.06■□□□□ 0.8
LINC01960-201ENST00000563759 DGCR6LQ9BY27 220 aa20.06■□□□□ 0.8
LINC01960-201ENST00000563759 GABARAPL3Q9BY60 117 aa20.06■□□□□ 0.8
LINC01960-201ENST00000563759 NPRL3Q12980 569 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 CBFBQ13951 182 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 SWT1Q5T5J6 900 aaKnown RBP20.05■□□□□ 0.8
LINC01960-201ENST00000563759 BICRALQ6AI39 1079 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 WBP2NLQ6ICG8 309 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 KLHL17Q6TDP4 642 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 MBOAT2Q6ZWT7 520 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 NRMQ8IXM6 262 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 DND1Q8IYX4 353 aaKnown RBP20.05■□□□□ 0.8
LINC01960-201ENST00000563759 DUSP19Q8WTR2 217 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 DNAJA4Q8WW22 397 aaPredicted RBP20.05■□□□□ 0.8
LINC01960-201ENST00000563759 TMEM239Q8WW34 195 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 MPP4Q96JB8 637 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 FER1L6-AS2Q96M78 137 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 UCK2Q9BZX2 261 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 HPF1Q9NWY4 346 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 ICAM5Q9UMF0 924 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 DCHS1Q96JQ0 3298 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 LOC100130705A0A1B0GUX0 176 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 TRABD2BA6NFA1 517 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 LYPD3O95274 346 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 P2RX1P51575 399 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 RPP38P78345 283 aaKnown RBP20.05■□□□□ 0.8
LINC01960-201ENST00000563759 C17orf67Q0P5P2 114 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 JMJD6Q6NYC1 403 aaPredicted RBP20.05■□□□□ 0.8
LINC01960-201ENST00000563759 C1orf94Q6P1W5 598 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 ZER1Q7Z7L7 766 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 PARP8Q8N3A8 854 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 CLEC1AQ8NC01 280 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 OR5W2Q8NH69 310 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 B4GALNT2Q8NHY0 566 aa20.05■□□□□ 0.8
LINC01960-201ENST00000563759 FAM46AQ96IP4 442 aaKnown RBP20.05■□□□□ 0.8
LINC01960-201ENST00000563759 CNTRLQ7Z7A1 2325 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 KPNA4O00629 521 aaPredicted RBP20.04■□□□□ 0.8
LINC01960-201ENST00000563759 BCKDKO14874 412 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 PIP5K1CO60331 668 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 PGCP20142 388 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 MYF6P23409 242 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 ITGA3P26006 1051 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 ALDH6A1Q02252 535 aaKnown RBP20.04■□□□□ 0.8
LINC01960-201ENST00000563759 AIMP2Q13155 320 aaKnown RBP20.04■□□□□ 0.8
LINC01960-201ENST00000563759 B3GNTL1Q67FW5 361 aaPredicted RBP20.04■□□□□ 0.8
LINC01960-201ENST00000563759 H3F3CQ6NXT2 135 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 RNF138Q8WVD3 245 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 C3orf49Q96BT1 292 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 GRIP2Q9C0E4 1043 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 ATP13A2Q9NQ11 1180 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 RYDENQ9NUL5 291 aaKnown RBP20.04■□□□□ 0.8
LINC01960-201ENST00000563759 CNIH4Q9P003 139 aa20.04■□□□□ 0.8
LINC01960-201ENST00000563759 CHCHD2Q9Y6H1 151 aaPredicted RBP20.04■□□□□ 0.8
LINC01960-201ENST00000563759 CELSR3Q9NYQ7 3312 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 C2orf72A6NCS6 295 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 MEP1AQ16819 746 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 COL28A1Q2UY09 1125 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 ACER2Q5QJU3 275 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 ATP1A1-AS1Q5TC04 95 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 OR5M10Q6IEU7 315 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 SDHAF3Q9NRP4 125 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 UBAP1Q9NZ09 502 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 PPP4R1LQ9P1A2 415 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 TEKT2Q9UIF3 430 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 KLK13Q9UKR3 277 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 WIF1Q9Y5W5 379 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 AKAP13Q12802 2813 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 ASPMQ8IZT6 3477 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 ADAM10O14672 748 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 GNB5O14775 395 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 SLC16A6O15403 523 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 EPHA2P29317 976 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 TBC1D25Q3MII6 688 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 USP51Q70EK9 711 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 PRICKLE2Q7Z3G6 844 aa20.03■□□□□ 0.8
LINC01960-201ENST00000563759 LSRQ86X29 649 aaPredicted RBP20.03■□□□□ 0.8
LINC01960-201ENST00000563759 MEX3DQ86XN8 651 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms