RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 AGRPO00253 132 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 DLL1O00548 723 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 FRS3O43559 492 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 MITFO75030 526 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 REM1O75628 298 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ZFAND5O76080 213 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 SEC24DO94855 1032 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 UTS2O95399 124 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 BPNT1O95861 308 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 GASTP01350 101 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 CCDC159P0C7I6 412 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 CYP4B1P13584 511 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF28P17035 718 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ITIH1P19827 911 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 GGT2P36268 569 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 GPR143P51810 404 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 NR0B1P51843 470 aaKnown RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 EFNA3P52797 238 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 SLC26A5P58743 744 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ISL1P61371 349 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 RPP38P78345 283 aaKnown RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ALDH6A1Q02252 535 aaKnown RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 TCF15Q12870 199 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 TSPAN31Q12999 210 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 RAPSNQ13702 412 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 OR1Q1Q15612 314 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 RPL13AP3Q6NVV1 102 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ULK3Q6PHR2 472 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 KLHL17Q6TDP4 642 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 MBOAT2Q6ZWT7 520 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 GDF7Q7Z4P5 450 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 P3H2Q8IVL5 708 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ESX1Q8N693 406 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 SLC15A4Q8N697 577 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF321PQ8N8H1 164 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 FAM71CQ8NEG0 241 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 NFAM1Q8NET5 270 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 PRSS33Q8NF86 280 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 TSPAN14Q8NG11 270 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 SLC22A8Q8TCC7 542 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 DNAJA4Q8WW22 397 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF566Q969W8 418 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 EFHD2Q96C19 240 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 NIPSNAP1Q9BPW8 284 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 TBL1XR1Q9BZK7 514 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 IMPAD1Q9NX62 359 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 NDUFA13Q9P0J0 144 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 PISDQ9UG56 409 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 SLC7A7Q9UM01 511 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 PTRH2Q9Y3E5 179 aaKnown RBP8.91□□□□□ -0.98
UBFD1-202ENST00000563366 B3GALT1Q9Y5Z6 326 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 WDFY4Q6ZS81 3184 aa8.91□□□□□ -0.98
UBFD1-202ENST00000563366 WDR87Q6ZQQ6 2873 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 NPIPA5A0A0B4J1W7 369 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TRBV11-1A0A0K0K1C0 115 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CENPVL1A0A0U1RR11 272 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TRIM64A6NGJ6 449 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CLDN24A6NM45 220 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 ALG1L2C9J202 215 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 NPIPA7E9PJI5 369 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 E9PQ18 207 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 H3BN98 237 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 GTPBP1O00178 669 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 ZNF264O43296 627 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 EIF4E2O60573 245 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TSPAN2O60636 221 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TPST2O60704 377 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 MRPS14O60783 128 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CLIC3O95833 236 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 DLGAP3O95886 979 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 NPIPA8P0DM63 369 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 ICAM2P13598 275 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 MMP11P24347 488 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 FPR3P25089 353 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 ABCD3P28288 659 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 LIMK1P53667 647 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CRISP1P54107 249 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 NR1H2P55055 460 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 RPS15P62841 145 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CD47Q08722 323 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 SEC23BQ15437 767 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 ALG10BQ5I7T1 473 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 C6orf141Q5SZD1 244 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 HES3Q5TGS1 186 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 STPG1Q5TH74 334 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 ZAR1Q86SH2 424 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 SLCO6A1Q86UG4 719 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 DND1Q8IYX4 353 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 SLC43A2Q8N370 569 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CLDN22Q8N7P3 220 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 OR4C3Q8NH37 302 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 UBASH3BQ8TF42 649 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 FBLIM1Q8WUP2 373 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TRUB1Q8WWH5 349 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 CNOT9Q92600 299 aaKnown RBP8.9□□□□□ -0.98
UBFD1-202ENST00000563366 NKD1Q969G9 470 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 TMCO6Q96DC7 493 aa8.9□□□□□ -0.98
UBFD1-202ENST00000563366 OMA1Q96E52 524 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms