RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CRYBA2P53672 197 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 COPZ1P61923 177 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 EPS8Q12929 822 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 DUSP7Q16829 419 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 AAGABQ6PD74 315 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 TRILQ7L0X0 811 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 SPPL2CQ8IUH8 684 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 ULK2Q8IYT8 1036 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 EID3Q8N140 333 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 GPR32P1Q8NGA4 272 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 NEIL3Q8TAT5 605 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 ST8SIA1Q92185 356 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 ASB9Q96DX5 294 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 CADM1Q9BY67 442 aaKnown RBP17.07■□□□□ 0.32
RAB40C-207ENST00000563109 TRIM15Q9C019 465 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 MMADHCQ9H3L0 296 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-207ENST00000563109 TESQ9UGI8 421 aaKnown RBP17.07■□□□□ 0.32
RAB40C-207ENST00000563109 RALYQ9UKM9 306 aaKnown RBP17.07■□□□□ 0.32
RAB40C-207ENST00000563109 PRDM4Q9UKN5 801 aa17.07■□□□□ 0.32
RAB40C-207ENST00000563109 C7orf72A4D263 438 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 FAAHO00519 579 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 AP3D1O14617 1153 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 FRS3O43559 492 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 SUSD5O60279 629 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 GP1BBP13224 206 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 SELENOWP63302 87 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 RBPJQ06330 500 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 FOXF1Q12946 379 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 TRIM25Q14258 630 aaKnown RBP17.06■□□□□ 0.32
RAB40C-207ENST00000563109 ARHGAP11AQ6P4F7 1023 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 GFRALQ6UXV0 394 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 CBLL1Q75N03 491 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 LRGUKQ96M69 825 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 ARHGDIGQ99819 225 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 ACTR3BQ9P1U1 418 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 COL6A6A6NMZ7 2263 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 BOD1L1Q8NFC6 3051 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 SPTA1P02549 2419 aa17.06■□□□□ 0.32
RAB40C-207ENST00000563109 HEATR5AQ86XA9 2040 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 LINC01387J3KSC0 135 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 M0R3H8 397 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 AQP7O14520 342 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 ZIC3O60481 467 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 EPPINO95925 133 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 PRKCAP17252 672 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 IDH2P48735 452 aaKnown RBP17.05■□□□□ 0.32
RAB40C-207ENST00000563109 TLE1Q04724 770 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 C19orf57Q0VDD7 668 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 TOMM34Q15785 309 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-207ENST00000563109 NRF1Q16656 503 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 MTX3Q5HYI7 312 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 FKBP9P1Q75LS8 142 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 DHFR2Q86XF0 187 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 CADM2Q8N3J6 435 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 GTPBP8Q8N3Z3 284 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-207ENST00000563109 VANGL1Q8TAA9 524 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-207ENST00000563109 MRGPRX4Q96LA9 322 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 KLHDC3Q9BQ90 382 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 ZNF559Q9BR84 538 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 PLSCR2Q9NRY7 297 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 ACER3Q9NUN7 267 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 DCAF13Q9NV06 445 aaKnown RBP17.05■□□□□ 0.32
RAB40C-207ENST00000563109 RPS6KB2Q9UBS0 482 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 SLC6A5Q9Y345 797 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 SH3GLB1Q9Y371 365 aa17.05■□□□□ 0.32
RAB40C-207ENST00000563109 PCNX3Q9H6A9 2034 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 A0A1B0GTH9 108 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 A0A1B0GVC2 190 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 ACTL6AO96019 429 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 FREM3P0C091 2139 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 PRG2P13727 222 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 CHMP24386 653 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 ADH6P28332 368 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 ACAA2P42765 397 aaKnown RBP17.04■□□□□ 0.32
RAB40C-207ENST00000563109 HTR3AP46098 478 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 SESN3P58005 492 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 HSF1Q00613 529 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 TRAP1Q12931 704 aaKnown RBP17.04■□□□□ 0.32
RAB40C-207ENST00000563109 IFI44LQ53G44 452 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 WBP2NLQ6ICG8 309 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 LCN8Q6JVE9 175 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 CYP2R1Q6VVX0 501 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 GRINAQ7Z429 371 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 YTHDF3Q7Z739 585 aaKnown RBP17.04■□□□□ 0.32
RAB40C-207ENST00000563109 CARM1Q86X55 608 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 ST6GALNAC3Q8NDV1 305 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 OR52E4Q8NGH9 312 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 OR5M1Q8NGP8 315 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 GEMIN6Q8WXD5 167 aaKnown RBP17.04■□□□□ 0.32
RAB40C-207ENST00000563109 SARAFQ96BY9 339 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 HSH2DQ96JZ2 352 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 RSPO3Q9BXY4 272 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-207ENST00000563109 STOML1Q9UBI4 398 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 FAM208BQ5VWN6 2430 aa17.04■□□□□ 0.32
RAB40C-207ENST00000563109 OR2M5A3KFT3 312 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 OR14I1A6ND48 311 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 SHISA8B8ZZ34 492 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ADAM11O75078 769 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms