RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZNF311Q5JNZ3 666 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 RNF220Q5VTB9 566 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 C1QL3Q5VWW1 255 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 BNC2Q6ZN30 1099 aaPredicted RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 CCDC80Q76M96 950 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 EIF3MQ7L2H7 374 aaKnown RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 RBM45Q8IUH3 476 aaKnown RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 MISPQ8IVT2 679 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 PEX5LQ8IYB4 626 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 GHDCQ8N2G8 530 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 METTL25Q8N6Q8 603 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 GALNT11Q8NCW6 608 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 OR5M9Q8NGP3 310 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 OR5W2Q8NH69 310 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 OR14L1PQ8NHC6 308 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 CLPTM1LQ96KA5 538 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 RNF145Q96MT1 663 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 CDRT15Q96T59 188 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 SH3GL1Q99961 368 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 SPATA9Q9BWV2 254 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 ALG2Q9H553 416 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 LDAHQ9H6V9 325 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 TAS2R1Q9NYW7 299 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 ADA2Q9NZK5 511 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 CD300AQ9UGN4 299 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 EGFL7Q9UHF1 273 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 SH3BGRL2Q9UJC5 107 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 TINAGQ9UJW2 476 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 OSGIN2Q9Y236 505 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 ANGPT4Q9Y264 503 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 SLC35A3Q9Y2D2 325 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 ZNF337Q9Y3M9 751 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 MYO9AB2RTY4 2548 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 C15orf38-AP3S2A0A0A6YYH1 394 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 ELOVL7A1L3X0 281 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 TMEM247A6NEH6 219 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 H3BNH8 94 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 M0R3H8 397 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 SUSD5O60279 629 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 HCN1O60741 890 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 SLC19A2O60779 497 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 SEMA7AO75326 666 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 PDE5AO76074 875 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 NUDT14O95848 222 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 TCN1P20061 433 aaPredicted RBP8.84□□□□□ -0.99
CLK3-208ENST00000562626 FUT4P22083 530 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 CALB2P22676 271 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 MSX1P28360 303 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 PTGS2P35354 604 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 CLDN20P56880 219 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 MXRA7P84157 204 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 EPS8Q12929 822 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 GNA13Q14344 377 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 FXNQ16595 210 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 LIN52Q52LA3 116 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 RAET1LQ5VY80 246 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 VASNQ6EMK4 673 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 RTL6Q6ICC9 239 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 DHRS4L2Q6PKH6 230 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 Q6ZPB1 254 aaPredicted RBP8.84□□□□□ -0.99
CLK3-208ENST00000562626 ARPINQ7Z6K5 226 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 CD163Q86VB7 1156 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 DOLPP1Q86YN1 238 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 ARMC8Q8IUR7 673 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 GRAMD2AQ8IUY3 354 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 MARVELD2Q8N4S9 558 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 FAM86B1Q8N7N1 296 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 FAM57AQ8TBR7 257 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 PMM1Q92871 262 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 SFXN2Q96NB2 322 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 TIMP4Q99727 224 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 ARHGDIGQ99819 225 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 PCDHAC1Q9H158 963 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 EXO5Q9H790 373 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 TMEM185BQ9H7F4 350 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 SPAG4Q9NPE6 437 aa8.84□□□□□ -0.99
CLK3-208ENST00000562626 EXOSC3Q9NQT5 275 aaKnown RBP8.84□□□□□ -0.99
CLK3-208ENST00000562626 MRPS18CQ9Y3D5 142 aaKnown RBP8.84□□□□□ -0.99
CLK3-208ENST00000562626 DOPEY2Q9Y3R5 2298 aa8.83□□□□□ -1
CLK3-208ENST00000562626 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.83□□□□□ -1
CLK3-208ENST00000562626 H3BML4 177 aa8.83□□□□□ -1
CLK3-208ENST00000562626 ETV2O00321 342 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 CXCR6O00574 342 aa8.83□□□□□ -1
CLK3-208ENST00000562626 LGI1O95970 557 aa8.83□□□□□ -1
CLK3-208ENST00000562626 TPOP07202 933 aa8.83□□□□□ -1
CLK3-208ENST00000562626 HSD17B1P14061 328 aa8.83□□□□□ -1
CLK3-208ENST00000562626 ZNF708P17019 499 aa8.83□□□□□ -1
CLK3-208ENST00000562626 GGT1P19440 569 aa8.83□□□□□ -1
CLK3-208ENST00000562626 PRKAR1BP31321 381 aa8.83□□□□□ -1
CLK3-208ENST00000562626 KDELR2P33947 212 aa8.83□□□□□ -1
CLK3-208ENST00000562626 KCNJ5P48544 419 aa8.83□□□□□ -1
CLK3-208ENST00000562626 IDH2P48735 452 aaKnown RBP8.83□□□□□ -1
CLK3-208ENST00000562626 SUMO3P55854 103 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 SESN3P58005 492 aa8.83□□□□□ -1
CLK3-208ENST00000562626 BNIP1Q12981 228 aa8.83□□□□□ -1
CLK3-208ENST00000562626 CBFBQ13951 182 aa8.83□□□□□ -1
CLK3-208ENST00000562626 VEZF1Q14119 521 aa8.83□□□□□ -1
CLK3-208ENST00000562626 GANABQ14697 944 aaKnown RBP8.83□□□□□ -1
CLK3-208ENST00000562626 LARS2Q15031 903 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms