RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TMEM229AB2RXF0 380 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 NPIPA2E9PIF3 369 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 NPIPA3F8WFD2 350 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 NME4O00746 187 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 AIM2O14862 343 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 EFNA2O43921 213 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 SEMA7AO75326 666 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 LDLRP01130 860 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 UBTFL6P0CB48 400 aaPredicted RBP12.12□□□□□ -0.47
CDH1-204ENST00000562118 GABRA1P14867 456 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 IL7RP16871 459 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 CPOXP36551 454 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 SLC6A8P48029 635 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 NUDT2P50583 147 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 KCNC4Q03721 635 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 EPS8Q12929 822 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 CYP51A1Q16850 503 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 C1QL3Q5VWW1 255 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 CLIP4Q8N3C7 705 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 FAM26EQ8N5C1 309 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 BHLHE22Q8NFJ8 381 aaPredicted RBP12.12□□□□□ -0.47
CDH1-204ENST00000562118 BCAS4Q8TDM0 211 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 SFXN2Q96NB2 322 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 ACER3Q9NUN7 267 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 ZNF337Q9Y3M9 751 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 DIDO1Q9BTC0 2240 aaKnown RBP12.12□□□□□ -0.47
CDH1-204ENST00000562118 PTPN13Q12923 2485 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
CDH1-204ENST00000562118 MYO7BQ6PIF6 2116 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 FIGNL2A6NMB9 653 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 C5orf58C9J3I9 102 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 GTPBP1O00178 669 aaKnown RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 SYT5O00445 386 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 TPOP07202 933 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 C8BP07358 591 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PEPDP12955 493 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PGCP20142 388 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 CD247P20963 164 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ACVR2AP27037 513 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 RNF144AP50876 292 aaPredicted RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 ZNF41P51814 821 aaPredicted RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 ZNF136P52737 540 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 RAC1P63000 192 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ADORA2A-AS1P86434 159 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 DMTNQ08495 405 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 FOXF1Q12946 379 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 LARS2Q15031 903 aaKnown RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 QPRTQ15274 297 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 CTU2Q2VPK5 515 aaKnown RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 WLSQ5T9L3 541 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ENPP6Q6UWR7 440 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PATL1Q86TB9 770 aaKnown RBP12.11□□□□□ -0.47
CDH1-204ENST00000562118 KRT73Q86Y46 540 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PGAM4Q8N0Y7 254 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ZNF614Q8N883 585 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 RNF145Q96MT1 663 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 SPATA5L1Q9BVQ7 753 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PINK1Q9BXM7 581 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 ADAM19Q9H013 955 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 CLCF1Q9UBD9 225 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 TNFRSF10DQ9UBN6 386 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 USP22Q9UPT9 525 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
CDH1-204ENST00000562118 PCNX1Q96RV3 2341 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 MED12LQ86YW9 2145 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 SPTAN1Q13813 2472 aaKnown RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 PRORSD1PA6NEY8 169 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 CD8B2A6NJW9 211 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 ADAMDEC1O15204 470 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 LRRTM2O43300 516 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 FZD7O75084 574 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 AGAP20933 346 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 GCKP35557 465 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 KCNJ5P48544 419 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 SLC7A2P52569 658 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 SESN3P58005 492 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 PSME3P61289 254 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 TOMM20Q15388 145 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 ZNF311Q5JNZ3 666 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 INTS11Q5TA45 600 aaKnown RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 RAET1LQ5VY80 246 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 NSUN5P2Q63ZY6 315 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 MTFR2Q6P444 385 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 EID3Q8N140 333 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 LSMEM1Q8N8F7 131 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms