RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ZNF671Q8TAW3 534 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 TMEM239Q8WW34 195 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 GIMAP5Q96F15 307 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 STON1Q9Y6Q2 735 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CENPVL1A0A0U1RR11 272 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 TRAPPC13A5PLN9 417 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 STX11O75558 287 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 RCBTB2O95199 551 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 GYPBP06028 91 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 SBK2P0C263 348 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 UBL4AP11441 157 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 ATF1P18846 271 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 NOS3P29474 1203 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 BTN3A2P78410 334 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 HSD17B12Q53GQ0 312 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 SFRP4Q6FHJ7 346 aaPredicted RBP12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 MTSS1LQ765P7 747 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 PXKQ7Z7A4 578 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 BPHLQ86WA6 291 aaPredicted RBP12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 LNX2Q8N448 690 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 FTMTQ8N4E7 242 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 OR56B4Q8NH76 319 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 SMPDL3BQ92485 455 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 RBCK1Q9BYM8 510 aa12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 METTL17Q9H7H0 456 aaPredicted RBP12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 PPIEQ9UNP9 301 aaKnown RBP12.96□□□□□ -0.33
VPS9D1-202ENST00000561976 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 OR5K3A6NET4 321 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 IGLON5A6NGN9 336 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 RIIAD1A6NNX1 92 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 LCN1P31025 176 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 ARFIP1P53367 373 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 NRG3P56975 720 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 ERVK-21P61565 698 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF85Q03923 595 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 PUDPQ08623 228 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 CAMK1Q14012 370 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC22A10Q63ZE4 541 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 MFSD12Q6NUT3 480 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 WDR88Q6ZMY6 472 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 MS4A15Q8N5U1 240 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 LSMEM1Q8N8F7 131 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF527Q8NB42 609 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 OR7G2Q8NG99 324 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 OR13C2Q8NGS9 318 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 PIGKQ92643 395 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 PGLYRP3Q96LB9 341 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF681Q96N22 645 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 PRSS27Q9BQR3 290 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 CHIAQ9BZP6 476 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 ACTR6Q9GZN1 396 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC6A20Q9NP91 592 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 CMC2Q9NRP2 79 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 OR6C2Q9NZP2 312 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 KCNK6Q9Y257 313 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 OR1A2Q9Y585 309 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 MAB21L2Q9Y586 359 aa12.96□□□□□ -0.34
VPS9D1-202ENST00000561976 M0R233 179 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 FLRT2O43155 660 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 FGF19O95750 216 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 HPXP02790 462 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ASGR2P07307 311 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 P2RY2P41231 377 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF136P52737 540 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 NRROSQ86YC3 692 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 SRFBP1Q8NEF9 429 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 OR51A7Q8NH64 312 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 OR4C6Q8NH72 309 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ERMAPQ96PL5 475 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 RBP7Q96R05 134 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ORAI3Q9BRQ5 295 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF436Q9C0F3 470 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ADGRL4Q9HBW9 690 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 CLDND1Q9NY35 253 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ABRACLQ9P1F3 81 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 APOBEC3BQ9UH17 382 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 FBXO9Q9UK97 447 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 FBXL4Q9UKA2 621 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 ACSL5Q9ULC5 683 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 AK6Q9Y3D8 172 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 PCDH8O95206 1070 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 EPXP11678 715 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 PTGS2P35354 604 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 GDNFP39905 211 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 SELENOPP49908 381 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 CRMP1Q14194 572 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 OR1Q1Q15612 314 aa12.95□□□□□ -0.34
VPS9D1-202ENST00000561976 TP53I3Q53FA7 332 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms