RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 SEMA6CQ9H3T2 930 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 WDCPQ9H6R7 721 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 SEC61A2Q9H9S3 476 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 NMNAT1Q9HAN9 279 aaPredicted RBP6.77□□□□□ -1.33
CDH1-203ENST00000561751 TPT1P8Q9HAU6 139 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 NOX3Q9HBY0 568 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 HRASLSQ9HDD0 168 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 TLR8Q9NR97 1041 aaKnown RBP6.77□□□□□ -1.33
CDH1-203ENST00000561751 SLC6A13Q9NSD5 602 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 UQCC1Q9NVA1 299 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 TAS2R8Q9NYW2 309 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 CFAP97Q9P2B7 532 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 MARCH4Q9P2E8 410 aaPredicted RBP6.77□□□□□ -1.33
CDH1-203ENST00000561751 NFKBIL1Q9UBC1 381 aaPredicted RBP6.77□□□□□ -1.33
CDH1-203ENST00000561751 EIF2B4Q9UI10 523 aaKnown RBP6.77□□□□□ -1.33
CDH1-203ENST00000561751 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 ADAMTS5Q9UNA0 930 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 PCDHB1Q9Y5F3 818 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 MTCH2Q9Y6C9 303 aa6.77□□□□□ -1.33
CDH1-203ENST00000561751 COL4A4P53420 1690 aaPredicted RBP6.77□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3DA0A087WVF3 549 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3IA0A087WXS9 549 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3EA0A087X179 549 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3KA0A087X1G2 549 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 A0A0G2JLL6 359 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 C2orf92A0A1B0GVN3 265 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 TMEM72A0PK05 275 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 C1orf226A1L170 272 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3FA6NER0 549 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 TMEM210A6NLX4 147 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SEC14L6B5MCN3 397 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3LB9A6J9 549 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 FAM72CH0Y354 149 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 M0QZK8 103 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 MFNGO00587 321 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 ARPC5O15511 151 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TGOLN2O43493 480 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 OR2T1O43869 369 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 FADS1O60427 444 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 UGDHO60701 494 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 NDUFS3O75489 264 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 GCM2O75603 506 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 TOXO94900 526 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SIX6O95475 246 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 IFNW1P05000 195 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HLA-DQB2P05538 268 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 EIF4EP06730 217 aaKnown RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 HEXBP07686 556 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 C1SP09871 688 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 OR8U8P0C7N1 319 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 MYCLP12524 364 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 HSD3B1P14060 373 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HSD3B2P26439 372 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 CD1CP29017 333 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 DDTP30046 118 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 PTGER3P43115 390 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 GIPRP48546 466 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 AGTR2P50052 363 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 CRYBA2P53672 197 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SCAND1P57086 179 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SKP1P63208 163 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 BCL2L1Q07817 233 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 PJVKQ0ZLH3 352 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 ELAVL2Q12926 359 aaKnown RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 CRHR2Q13324 411 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 ZSWIM7Q19AV6 140 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 ENTPD8Q5MY95 495 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 EOGTQ5NDL2 527 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HIST2H3PS2Q5TEC6 136 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 FAM72AQ5TYM5 149 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 LIPJQ5W064 366 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 IL31Q6EBC2 164 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3CQ6IPX1 549 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 FAM72DQ6L9T8 149 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SFXN4Q6P4A7 337 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HIST2H3AQ71DI3 136 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SLC36A1Q7Z2H8 476 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 PRRT2Q7Z6L0 340 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 PXKQ7Z7A4 578 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 LDB1Q86U70 411 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 TMEM200AQ86VY9 491 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 FAM72BQ86X60 149 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 CBLN2Q8IUK8 224 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 TP53INP2Q8IXH6 220 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 DMRTC2Q8IXT2 367 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 TBC1D3Q8IZP1 549 aaPredicted RBP6.76□□□□□ -1.33
CDH1-203ENST00000561751 COMMD1Q8N668 190 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 KRTCAP2Q8N6L1 136 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SAMD12Q8N8I0 201 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 SDR9C7Q8NEX9 313 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 OR2AK2Q8NG84 335 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 OR52N2Q8NGI0 321 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 OR9A4Q8NGU2 314 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 OR5R1Q8NH85 324 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HUS1BQ8NHY5 278 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 CLEC4CQ8WTT0 213 aa6.76□□□□□ -1.33
CDH1-203ENST00000561751 HIST1H2BAQ96A08 127 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms